STRINGSTRING
DDX23 DDX23 PRPF6 PRPF6 EFTUD2 EFTUD2 SNRNP200 SNRNP200 SNRNP40 SNRNP40
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDX23Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (688 aa)
PRPF6Pre-mRNA-processing factor 6. (917 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (1616 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (310 aa)
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.