(12 nodes) Fructose 1,6-bisphosphate metabolic process, and Glucose 6-phosphate metabolic process network (Egretta garzetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z169_07407	Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family. (282 aa)
	Z169_07408	Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family. (340 aa)
	GPI	Glucose-6-phosphate isomerase; Belongs to the GPI family. (514 aa)
	HK1	Hexokinase-1. (919 aa)
	TKT	Transketolase. (591 aa)
	PMM2	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (224 aa)
	PFKP	6-phosphofructokinase type C. (768 aa)
	HK2	Hexokinase-2. (897 aa)
	MPI	Mannose-6-phosphate isomerase. (422 aa)
	ALDOC	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (364 aa)
	PFKL	6-phosphofructokinase, liver type. (741 aa)
	TALDO1	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (295 aa)

Your Current Organism:

Egretta garzetta

NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDOC	GPI	A0A091JMN6	A0A091IYW8	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.952
ALDOC	HK1	A0A091JMN6	A0A091J3K5	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Hexokinase-1.	0.848
ALDOC	HK2	A0A091JMN6	A0A091JGJ9	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Hexokinase-2.	0.848
ALDOC	PFKL	A0A091JMN6	A0A091KA59	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	6-phosphofructokinase, liver type.	0.960
ALDOC	PFKP	A0A091JMN6	A0A091JEE6	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	6-phosphofructokinase type C.	0.960
ALDOC	TALDO1	A0A091JMN6	A0A091KAB6	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.955
ALDOC	TKT	A0A091JMN6	A0A091J9E5	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Transketolase.	0.983
ALDOC	Z169_07407	A0A091JMN6	A0A091IM47	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family.	0.960
ALDOC	Z169_07408	A0A091JMN6	A0A091IPE8	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family.	0.960
GPI	ALDOC	A0A091IYW8	A0A091JMN6	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.952
GPI	HK1	A0A091IYW8	A0A091J3K5	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Hexokinase-1.	0.974
GPI	HK2	A0A091IYW8	A0A091JGJ9	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Hexokinase-2.	0.975
GPI	MPI	A0A091IYW8	A0A091JJJ3	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Mannose-6-phosphate isomerase.	0.991
GPI	PFKL	A0A091IYW8	A0A091KA59	Glucose-6-phosphate isomerase; Belongs to the GPI family.	6-phosphofructokinase, liver type.	0.995
GPI	PFKP	A0A091IYW8	A0A091JEE6	Glucose-6-phosphate isomerase; Belongs to the GPI family.	6-phosphofructokinase type C.	0.995
GPI	PMM2	A0A091IYW8	A0A091J9E8	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.857
GPI	TALDO1	A0A091IYW8	A0A091KAB6	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.989
GPI	TKT	A0A091IYW8	A0A091J9E5	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Transketolase.	0.996
GPI	Z169_07407	A0A091IYW8	A0A091IM47	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family.	0.983
GPI	Z169_07408	A0A091IYW8	A0A091IPE8	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family.	0.983