(16 nodes) Monoubiquitinated histone H2A deubiquitination network (Egretta garzetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	USP16	Ubiquitin carboxyl-terminal hydrolase. (802 aa)
	TADA1	Transcriptional adapter 1. (311 aa)
	SF3B3	Splicing factor 3B subunit 3. (1230 aa)
	ATXN7L1	Ataxin-7-like 1. (768 aa)
	SUPT3H	Transcription initiation protein SPT3. (332 aa)
	TAF5	Transcription initiation factor TFIID subunit 5. (611 aa)
	Z169_05001	Transcription initiation factor TFIID subunit 4. (259 aa)
	TAF12	Transcription initiation factor TFIID subunit 12. (161 aa)
	Z169_15476	Transcription initiation factor TFIID subunit 10. (134 aa)
	SUPT7L	STAGA complex 65 subunit gamma. (414 aa)
	TAF5L	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)
	ENY2	Transcription and mRNA export factor ENY2. (99 aa)
	BAP1	Ubiquitin carboxyl-terminal hydrolase BAP1. (688 aa)
	MYSM1	Histone H2A deubiquitinase MYSM1. (797 aa)
	ATXN7	Ataxin-7. (773 aa)
	Z169_16168	Transcriptional adapter 3. (344 aa)

Your Current Organism:

Egretta garzetta

NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATXN7	ENY2	A0A091IQQ5	A0A091J791	Ataxin-7.	Transcription and mRNA export factor ENY2.	0.956
ATXN7	SF3B3	A0A091IQQ5	A0A091K789	Ataxin-7.	Splicing factor 3B subunit 3.	0.609
ATXN7	SUPT3H	A0A091IQQ5	A0A091JYN5	Ataxin-7.	Transcription initiation protein SPT3.	0.900
ATXN7	SUPT7L	A0A091IQQ5	A0A091JIM9	Ataxin-7.	STAGA complex 65 subunit gamma.	0.723
ATXN7	TADA1	A0A091IQQ5	A0A091KC44	Ataxin-7.	Transcriptional adapter 1.	0.766
ATXN7	TAF12	A0A091IQQ5	A0A091JL07	Ataxin-7.	Transcription initiation factor TFIID subunit 12.	0.926
ATXN7	TAF5	A0A091IQQ5	A0A091JUP3	Ataxin-7.	Transcription initiation factor TFIID subunit 5.	0.759
ATXN7	TAF5L	A0A091IQQ5	A0A091JIJ6	Ataxin-7.	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.	0.759
ATXN7	Z169_15476	A0A091IQQ5	A0A091JJP1	Ataxin-7.	Transcription initiation factor TFIID subunit 10.	0.952
ATXN7	Z169_16168	A0A091IQQ5	A0A091IPT7	Ataxin-7.	Transcriptional adapter 3.	0.946
ATXN7L1	ENY2	A0A091K2Y0	A0A091J791	Ataxin-7-like 1.	Transcription and mRNA export factor ENY2.	0.925
ATXN7L1	SF3B3	A0A091K2Y0	A0A091K789	Ataxin-7-like 1.	Splicing factor 3B subunit 3.	0.546
ATXN7L1	SUPT3H	A0A091K2Y0	A0A091JYN5	Ataxin-7-like 1.	Transcription initiation protein SPT3.	0.895
ATXN7L1	SUPT7L	A0A091K2Y0	A0A091JIM9	Ataxin-7-like 1.	STAGA complex 65 subunit gamma.	0.637
ATXN7L1	TADA1	A0A091K2Y0	A0A091KC44	Ataxin-7-like 1.	Transcriptional adapter 1.	0.740
ATXN7L1	TAF12	A0A091K2Y0	A0A091JL07	Ataxin-7-like 1.	Transcription initiation factor TFIID subunit 12.	0.921
ATXN7L1	TAF5	A0A091K2Y0	A0A091JUP3	Ataxin-7-like 1.	Transcription initiation factor TFIID subunit 5.	0.731
ATXN7L1	TAF5L	A0A091K2Y0	A0A091JIJ6	Ataxin-7-like 1.	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.	0.731
ATXN7L1	Z169_15476	A0A091K2Y0	A0A091JJP1	Ataxin-7-like 1.	Transcription initiation factor TFIID subunit 10.	0.948
ATXN7L1	Z169_16168	A0A091K2Y0	A0A091IPT7	Ataxin-7-like 1.	Transcriptional adapter 3.	0.941