STRINGSTRING
HMG20A HMG20A Z169_11982 Z169_11982 SOX10 SOX10 HMGXB3 HMGXB3 HMGB1 HMGB1 Z169_15566 Z169_15566 SOX30 SOX30 SOX11 SOX11 WDHD1 WDHD1 SSRP1 SSRP1 HBP1 HBP1 SOX6 SOX6 Z169_05275 Z169_05275 TOX3 TOX3 UBTF UBTF SOX7 SOX7 SOX8 SOX8 Z169_04590 Z169_04590 TOX TOX TFAM TFAM PMS1 PMS1 BBX BBX Z169_09975 Z169_09975 TCF7L2 TCF7L2 HMGB2 HMGB2 SOX14 SOX14 SMARCE1 SMARCE1 Z169_13826 Z169_13826 HMGB3 HMGB3 SOX2 SOX2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HMG20AHigh mobility group protein 20A. (348 aa)
Z169_11982HMG domain-containing protein 4. (571 aa)
SOX10Transcription factor SOX-10. (463 aa)
HMGXB3HMG domain-containing protein 3. (1318 aa)
HMGB1High mobility group protein B1. (215 aa)
Z169_15566Transcription factor SOX-5. (741 aa)
SOX30Transcription factor SOX-30. (526 aa)
SOX11Transcription factor SOX-11. (264 aa)
WDHD1WD repeat and HMG-box DNA-binding protein 1. (1123 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (705 aa)
HBP1HMG box-containing protein 1. (513 aa)
SOX6Transcription factor SOX-6. (789 aa)
Z169_05275TOX high mobility group box family member 2. (418 aa)
TOX3TOX high mobility group box family member 3. (551 aa)
UBTFNucleolar transcription factor 1. (738 aa)
SOX7Transcription factor SOX-7. (288 aa)
SOX8Transcription factor SOX-8. (324 aa)
Z169_04590Protein polybromo-1. (1690 aa)
TOXThymocyte selection-associated high mobility group box protein TOX. (459 aa)
TFAMUncharacterized protein. (197 aa)
PMS1PMS1 protein 1. (913 aa)
BBXHMG box transcription factor BBX. (888 aa)
Z169_09975Lymphoid enhancer-binding factor 1. (315 aa)
TCF7L2Transcription factor 7-like 2. (357 aa)
HMGB2High mobility group protein B2. (170 aa)
SOX14Transcription factor SOX-14. (235 aa)
SMARCE1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1. (412 aa)
Z169_13826Transcription factor SOX-3. (278 aa)
HMGB3High mobility group protein B3. (202 aa)
SOX2Transcription factor SOX-2. (298 aa)
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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