47 items (Egretta garzetta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z169_12027	MICAL-like 1. (845 aa)
	Z169_01797	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (132 aa)
	EIF4E1B	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (202 aa)
	RPS20	40S ribosomal protein S20. (118 aa)
	EIF3F	Eukaryotic translation initiation factor 3 subunit F. (213 aa)
	RPS11	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (155 aa)
	EIF3A	Eukaryotic translation initiation factor 3 subunit A. (1347 aa)
	Z169_01796	40S ribosomal protein S23. (50 aa)
	RPS2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (234 aa)
	Z169_08523	40S ribosomal protein S21. (39 aa)
	RPS6	40S ribosomal protein S6. (247 aa)
	RPS12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (127 aa)
	RPS3	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (234 aa)
	RPS4X	40S ribosomal protein S4. (202 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (297 aa)
	EIF3H	Eukaryotic translation initiation factor 3 subunit H. (308 aa)
	EIF3M	Eukaryotic translation initiation factor 3 subunit M. (361 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (130 aa)
	Z169_16227	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (117 aa)
	EIF3B	Eukaryotic translation initiation factor 3 subunit B. (631 aa)
	EIF3E	Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family. (416 aa)
	RPS8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (189 aa)
	EIF5	Eukaryotic translation initiation factor 5. (430 aa)
	Z169_00365	40S ribosomal protein S10. (58 aa)
	EIF2S2	Eukaryotic translation initiation factor 2 subunit 2. (331 aa)
	EIF2S3	Eukaryotic translation initiation factor 2 subunit 3. (429 aa)
	RPS13	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (143 aa)
	EIF3J	Eukaryotic translation initiation factor 3 subunit J. (209 aa)
	RPS3A	40S ribosomal protein S3a. (243 aa)
	EIF4E	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (211 aa)
	EIF4A2	Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (407 aa)
	ARL6IP1	ADP-ribosylation factor-like 6-interacting protein 1. (191 aa)
	Z169_03265	Eukaryotic translation initiation factor 4 gamma 1. (1497 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	Z169_16050	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (92 aa)
	EIF2S1	Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
	EIF1AX	Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (107 aa)
	RPS15A	40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (135 aa)
	EIF3L	Eukaryotic translation initiation factor 3 subunit L. (467 aa)
	EIF3I	Eukaryotic translation initiation factor 3 subunit I. (324 aa)
	EIF3D	Eukaryotic translation initiation factor 3 subunit D; Belongs to the eIF-3 subunit D family. (544 aa)
	Z169_06177	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (143 aa)
	RSRC1	Serine/Arginine-related protein 53. (331 aa)
	EIF4H	Eukaryotic translation initiation factor 4H. (235 aa)
	RPS17	40S ribosomal protein S17. (84 aa)
	RPS27L	40S ribosomal protein S27. (83 aa)
	RPS24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (130 aa)

Your Current Organism:

Egretta garzetta

NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6IP1	EIF1AX	A0A091IVZ6	A0A091IU58	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.987
ARL6IP1	EIF2S1	A0A091IVZ6	A0A091IUT3	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 2 subunit 1.	0.942
ARL6IP1	EIF2S2	A0A091IVZ6	A0A091J2A2	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 2 subunit 2.	0.910
ARL6IP1	EIF2S3	A0A091IVZ6	A0A091J0T9	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 2 subunit 3.	0.922
ARL6IP1	EIF3A	A0A091IVZ6	A0A091JAT2	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit A.	0.918
ARL6IP1	EIF3B	A0A091IVZ6	A0A091KDC5	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit B.	0.894
ARL6IP1	EIF3D	A0A091IVZ6	A0A091IPC4	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit D; Belongs to the eIF-3 subunit D family.	0.911
ARL6IP1	EIF3E	A0A091IVZ6	A0A091J6X4	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family.	0.912
ARL6IP1	EIF3F	A0A091IVZ6	A0A091JC49	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit F.	0.835
ARL6IP1	EIF3H	A0A091IVZ6	A0A091JPJ4	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit H.	0.821
ARL6IP1	EIF3I	A0A091IVZ6	A0A091IRC8	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit I.	0.873
ARL6IP1	EIF3J	A0A091IVZ6	A0A091IYH1	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit J.	0.852
ARL6IP1	EIF3L	A0A091IVZ6	A0A091IS17	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit L.	0.785
ARL6IP1	EIF3M	A0A091IVZ6	A0A091JQ01	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 3 subunit M.	0.858
ARL6IP1	EIF4A2	A0A091IVZ6	A0A091IWV3	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.	0.483
ARL6IP1	EIF4H	A0A091IVZ6	A0A091JKI5	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 4H.	0.464
ARL6IP1	EIF5	A0A091IVZ6	A0A091J3Y6	ADP-ribosylation factor-like 6-interacting protein 1.	Eukaryotic translation initiation factor 5.	0.819
ARL6IP1	RPS11	A0A091IVZ6	A0A091JB30	ADP-ribosylation factor-like 6-interacting protein 1.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.989
ARL6IP1	RPS12	A0A091IVZ6	A0A091JIZ4	ADP-ribosylation factor-like 6-interacting protein 1.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.980
ARL6IP1	RPS13	A0A091IVZ6	A0A091IZU7	ADP-ribosylation factor-like 6-interacting protein 1.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.988