39 items (Selenomonas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BCS37_01210	Multidrug transporter AcrB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (350 aa)
	AOH47210.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
	AOH47211.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AOH47212.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	AOH47256.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
	AOH47321.1	UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
	AOH47568.1	Carbamoylphosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	AOH47569.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	AOH47570.1	DUF454 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
	ftsE	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
	AOH47572.1	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (295 aa)
	AOH47573.1	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
	AOH47574.1	Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. (381 aa)
	AOH47575.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
	AOH47576.1	Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (368 aa)
	macB	Macrolide ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (239 aa)
	AOH47578.1	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	AOH47699.1	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	AOH47700.1	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
	AOH47701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	AOH47702.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	AOH47703.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	AOH47704.1	GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	AOH47705.1	FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
	AOH47706.1	Aminoacyl-histidine dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
	AOH49019.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (154 aa)
	hisS	histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	AOH49020.1	N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. (241 aa)
	AOH47710.1	Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	AOH47711.1	CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (237 aa)
	AOH47712.1	Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
	AOH47771.1	Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (396 aa)
	AOH47772.1	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1063 aa)
	AOH47895.1	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AOH48147.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (255 aa)
	AOH49048.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
	AOH48148.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	AOH48149.1	Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	AOH48150.1	Competence protein ComM; Derived by automated computational analysis using gene prediction method: Protein Homology. (51 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 1884263
Other names: S. sp. oral taxon 920, Selenomonas sp. oral taxon 920

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOH47210.1	AOH47211.1	BCS37_01585	BCS37_01590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
AOH47210.1	AOH47212.1	BCS37_01585	BCS37_01595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
AOH47210.1	AOH47699.1	BCS37_01585	BCS37_04230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AOH47210.1	AOH47700.1	BCS37_01585	BCS37_04235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
AOH47210.1	AOH47701.1	BCS37_01585	BCS37_04240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
AOH47210.1	AOH47702.1	BCS37_01585	BCS37_04245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AOH47210.1	AOH47703.1	BCS37_01585	BCS37_04250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
AOH47210.1	AOH47704.1	BCS37_01585	BCS37_04255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
AOH47210.1	AOH47705.1	BCS37_01585	BCS37_04260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
AOH47211.1	AOH47210.1	BCS37_01590	BCS37_01585	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
AOH47211.1	AOH47212.1	BCS37_01590	BCS37_01595	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AOH47211.1	AOH47578.1	BCS37_01590	BCS37_03545	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AOH47211.1	AOH47699.1	BCS37_01590	BCS37_04230	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AOH47211.1	AOH47700.1	BCS37_01590	BCS37_04235	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
AOH47211.1	AOH47701.1	BCS37_01590	BCS37_04240	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
AOH47211.1	AOH47702.1	BCS37_01590	BCS37_04245	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AOH47211.1	AOH47703.1	BCS37_01590	BCS37_04250	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
AOH47211.1	AOH47704.1	BCS37_01590	BCS37_04255	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
AOH47211.1	AOH47705.1	BCS37_01590	BCS37_04260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AOH47211.1	ftsE	BCS37_01590	BCS37_03510	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.677