(46 nodes) Integral component of membrane network (Selenomonas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOH48723.1	Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	nuoK	NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
	AOH47578.1	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	AOH47628.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AOH47642.1	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AOH47699.1	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	AOH47700.1	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
	AOH47701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	AOH47725.1	Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	AOH47771.1	Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (396 aa)
	AOH47797.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
	AOH47804.1	Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	crcB	Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (124 aa)
	argH	Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
	AOH47894.1	Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology. (863 aa)
	AOH48012.1	Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	uppP	Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (276 aa)
	mltG	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (365 aa)
	secF	Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (305 aa)
	secD	Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (410 aa)
	AOH48223.1	Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
	AOH48283.1	Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
	AOH48311.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AOH48313.1	Trk system potassium transport protein TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	AOH48884.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	AOH48314.1	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
	AOH48315.1	Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	AOH48337.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
	AOH48338.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (372 aa)
	AOH48387.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	AOH48388.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AOH48391.1	Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	rny	Ribonuclease Y; Endoribonuclease that initiates mRNA decay. (514 aa)
	dacA	TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (279 aa)
	AOH48517.1	Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	AOH48606.1	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	AOH48659.1	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	AOH47105.1	LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
	BCS37_01210	Multidrug transporter AcrB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (350 aa)
	AOH47214.1	Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (223 aa)
	AOH47252.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family. (255 aa)
	AOH47253.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	AOH47428.1	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	mraY	phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (328 aa)
	lgt	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (279 aa)
	nuoB	NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (179 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 1884263
Other names: S. sp. oral taxon 920, Selenomonas sp. oral taxon 920

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOH47214.1	AOH47253.1	BCS37_01605	BCS37_01805	Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.721
AOH47214.1	AOH48338.1	BCS37_01605	BCS37_07715	Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.879
AOH47252.1	AOH47253.1	BCS37_01800	BCS37_01805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AOH47252.1	AOH48606.1	BCS37_01800	BCS37_09205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.608
AOH47253.1	AOH47214.1	BCS37_01805	BCS37_01605	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.721
AOH47253.1	AOH47252.1	BCS37_01805	BCS37_01800	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.989
AOH47253.1	AOH47578.1	BCS37_01805	BCS37_03545	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AOH47253.1	AOH48337.1	BCS37_01805	BCS37_07710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
AOH47428.1	AOH47699.1	BCS37_02750	BCS37_04230	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AOH47428.1	AOH48387.1	BCS37_02750	BCS37_08005	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
AOH47578.1	AOH47253.1	BCS37_03545	BCS37_01805	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AOH47578.1	AOH47699.1	BCS37_03545	BCS37_04230	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
AOH47578.1	AOH47700.1	BCS37_03545	BCS37_04235	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AOH47578.1	AOH47771.1	BCS37_03545	BCS37_04625	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.877
AOH47578.1	BCS37_01210	BCS37_03545	BCS37_01210	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter AcrB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.879
AOH47628.1	rny	BCS37_03845	BCS37_08470	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribonuclease Y; Endoribonuclease that initiates mRNA decay.	0.558
AOH47642.1	AOH47699.1	BCS37_03920	BCS37_04230	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AOH47642.1	AOH48387.1	BCS37_03920	BCS37_08005	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AOH47699.1	AOH47428.1	BCS37_04230	BCS37_02750	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AOH47699.1	AOH47578.1	BCS37_04230	BCS37_03545	Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436