Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOH46982.1 | BCS37_00290 | BCS37_00295 | BCS37_00290 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ADP-ribosylglycohydrolase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| AOH47093.1 | AOH47407.1 | BCS37_00930 | BCS37_02635 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AOH47093.1 | AOH47408.1 | BCS37_00930 | BCS37_02645 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AOH47093.1 | AOH47412.1 | BCS37_00930 | BCS37_02670 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.894 |
| AOH47093.1 | AOH47914.1 | BCS37_00930 | BCS37_05415 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
| AOH47093.1 | AOH49029.1 | BCS37_00930 | BCS37_05425 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| AOH47093.1 | BCS37_02665 | BCS37_00930 | BCS37_02665 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter, nickel/metallophore periplasmic binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.899 |
| AOH47093.1 | nikC | BCS37_00930 | BCS37_02640 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AOH47093.1 | nikC-2 | BCS37_00930 | BCS37_05420 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AOH47376.1 | secA | BCS37_02470 | BCS37_10975 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.996 |
| AOH47376.1 | secD | BCS37_02470 | BCS37_07110 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.939 |
| AOH47376.1 | secE | BCS37_02470 | BCS37_03700 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.999 |
| AOH47376.1 | secF | BCS37_02470 | BCS37_07105 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.872 |
| AOH47376.1 | secY | BCS37_02470 | BCS37_08975 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.997 |
| AOH47395.1 | AOH47396.1 | BCS37_02575 | BCS37_02580 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
| AOH47396.1 | AOH47395.1 | BCS37_02580 | BCS37_02575 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
| AOH47407.1 | AOH47093.1 | BCS37_02635 | BCS37_00930 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AOH47407.1 | AOH47408.1 | BCS37_02635 | BCS37_02645 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| AOH47407.1 | AOH47412.1 | BCS37_02635 | BCS37_02670 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease subunit NikC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AOH47407.1 | AOH47914.1 | BCS37_02635 | BCS37_05415 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
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