(25 nodes) Mixed, incl. Axonemal microtubule, and Trichohyalin-plectin-homology domain network (Elysia chlorotica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EGW08_021012	Uncharacterized protein. (552 aa)
	EGW08_014112	Uncharacterized protein. (136 aa)
	EGW08_000036	Uncharacterized protein. (149 aa)
	EGW08_018271	Uncharacterized protein. (379 aa)
	EGW08_012928	Uncharacterized protein. (660 aa)
	EGW08_016719	Uncharacterized protein. (424 aa)
	EGW08_013625	Uncharacterized protein. (249 aa)
	EGW08_008329	Uncharacterized protein. (568 aa)
	EGW08_008050	Uncharacterized protein. (114 aa)
	EGW08_010833	Enkurin domain-containing protein. (255 aa)
	EGW08_010758	DUF667 domain-containing protein. (233 aa)
	EGW08_012121	Uncharacterized protein. (276 aa)
	EGW08_004496	Uncharacterized protein. (221 aa)
	EGW08_003639	Uncharacterized protein. (169 aa)
	EGW08_009816	Uncharacterized protein. (233 aa)
	EGW08_004110	Uncharacterized protein. (509 aa)
	EGW08_005776	Uncharacterized protein. (214 aa)
	EGW08_019520	Uncharacterized protein. (160 aa)
	EGW08_018954	Uncharacterized protein. (471 aa)
	EGW08_014906	Uncharacterized protein. (228 aa)
	EGW08_006426	Uncharacterized protein. (104 aa)
	EGW08_004515	WD_REPEATS_REGION domain-containing protein. (1292 aa)
	EGW08_002116	Uncharacterized protein. (422 aa)
	EGW08_002076	Transgelin; Belongs to the calponin family. (947 aa)
	EGW08_000612	Uncharacterized protein. (646 aa)

Your Current Organism:

Elysia chlorotica

NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia

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Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGW08_000036	EGW08_000612	A0A3S1A2G6	A0A433UCW6	Uncharacterized protein.	Uncharacterized protein.	0.478
EGW08_000036	EGW08_002116	A0A3S1A2G6	A0A433U8L4	Uncharacterized protein.	Uncharacterized protein.	0.633
EGW08_000036	EGW08_003639	A0A3S1A2G6	A0A3S1BHU0	Uncharacterized protein.	Uncharacterized protein.	0.681
EGW08_000036	EGW08_004110	A0A3S1A2G6	A0A3S1BT70	Uncharacterized protein.	Uncharacterized protein.	0.478
EGW08_000036	EGW08_004496	A0A3S1A2G6	A0A3S1BGG2	Uncharacterized protein.	Uncharacterized protein.	0.413
EGW08_000036	EGW08_004515	A0A3S1A2G6	A0A433U1R0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.457
EGW08_000036	EGW08_005776	A0A3S1A2G6	A0A3S1C9A6	Uncharacterized protein.	Uncharacterized protein.	0.622
EGW08_000036	EGW08_006426	A0A3S1A2G6	A0A433TW80	Uncharacterized protein.	Uncharacterized protein.	0.873
EGW08_000036	EGW08_008050	A0A3S1A2G6	A0A3S1BB42	Uncharacterized protein.	Uncharacterized protein.	0.622
EGW08_000036	EGW08_008329	A0A3S1A2G6	A0A3S1BAS1	Uncharacterized protein.	Uncharacterized protein.	0.650
EGW08_000036	EGW08_009816	A0A3S1A2G6	A0A3S1BJS3	Uncharacterized protein.	Uncharacterized protein.	0.622
EGW08_000036	EGW08_010758	A0A3S1A2G6	A0A3S1BE23	Uncharacterized protein.	DUF667 domain-containing protein.	0.622
EGW08_000036	EGW08_010833	A0A3S1A2G6	A0A3S1BDF0	Uncharacterized protein.	Enkurin domain-containing protein.	0.689
EGW08_000036	EGW08_012121	A0A3S1A2G6	A0A3S1BG91	Uncharacterized protein.	Uncharacterized protein.	0.666
EGW08_000036	EGW08_012928	A0A3S1A2G6	A0A3S1B401	Uncharacterized protein.	Uncharacterized protein.	0.541
EGW08_000036	EGW08_013625	A0A3S1A2G6	A0A3S1B9X7	Uncharacterized protein.	Uncharacterized protein.	0.408
EGW08_000036	EGW08_014112	A0A3S1A2G6	A0A3S0ZY99	Uncharacterized protein.	Uncharacterized protein.	0.642
EGW08_000036	EGW08_014906	A0A3S1A2G6	A0A433T702	Uncharacterized protein.	Uncharacterized protein.	0.655
EGW08_000036	EGW08_016719	A0A3S1A2G6	A0A3S1B9U5	Uncharacterized protein.	Uncharacterized protein.	0.457
EGW08_000036	EGW08_018271	A0A3S1A2G6	A0A3S1AWD9	Uncharacterized protein.	Uncharacterized protein.	0.525