(24 nodes) ABC transporter type 1, transmembrane domain MetI-like network (Streptomyces albus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMM06982.1	Alkanesulfonates transport system permease protein. (293 aa)
	AMM07057.1	Binding-protein-dependent transport system innermembrane component. (290 aa)
	AMM07557.1	Transmembrane protein. (313 aa)
	AMM07558.1	Transmembrane protein. (307 aa)
	AMM07744.1	Sugar ABC transporter permease. (288 aa)
	AMM07874.1	Glutamate transporter permease; Overlaps another CDS with the same product name. (221 aa)
	AMM07923.1	Oligopeptide transport system permease protein OppB. (359 aa)
	AMM07980.1	ABC transporter integral membrane protein. (546 aa)
	AMM08331.1	ABC-type amino acid transport system, permease component. (315 aa)
	AMM08480.1	Oligopeptide transport system permease protein OppC. (328 aa)
	AMM08481.1	Oligopeptide transport system permease protein OppB. (307 aa)
	AMM08519.1	Amino acid ABC transporter integral membrane protein. (216 aa)
	AMM09923.1	PstC protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (349 aa)
	AMM10105.1	ABC transporter permease. (236 aa)
	AMM12621.1	ABC transporter permease. (223 aa)
	AMM10569.1	Glycine betaine ABC transporter integral membrane protein. (664 aa)
	AMM10940.1	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name. (294 aa)
	AMM10941.1	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name. (326 aa)
	AMM12000.1	ABC transporter permease. (252 aa)
	AMM12402.1	Transmembrane sugar transporter; Overlaps another CDS with the same product name. (339 aa)
	AMM12403.1	Transmembrane sugar transporter; Overlaps another CDS with the same product name. (311 aa)
	AMM12609.1	ABC transporter permease. (341 aa)
	AMM12610.1	Peptide/opine/nickel uptake family ABC transporter. (296 aa)
	AMM12620.1	ABC transporter permease. (227 aa)

Your Current Organism:

Streptomyces albus

NCBI taxonomy Id: 1888
Other names: AS 4.164, ATCC 25426, ATCC 25427 [[Streptomyces almquistii]], ATCC 25453 [[Streptomyces flocculus]], ATCC 25490 [[Streptomyces rangoonensis]], ATCC 3004, ATCC 618 [[Streptomyces almquistii]], ATCC 6852 [[Streptomyces gibsonii]], ATCC 6860 [[Streptomyces rangoonensis]], Actinomyces Gibsoni, Actinomyces Gibsonii, Actinomyces almquisti, Actinomyces flocculus, Actinomyces rangoon, BCRC 10802, BCRC 12068 [[Streptomyces flocculus]], BCRC 12098 [[Streptomyces almquistii]], CBS 118.60 [[Streptomyces gibsonii]], CBS 119.60 [[Streptomyces gibsonii]], CBS 410.63, CBS 686.69 [[Streptomyces flocculus]], CBS 918.69 [[Streptomyces rangoonensis]], CBS 924.69, CBS 925.69 [[Streptomyces almquistii]], CCRC 10802, CCRC 12068 [[Streptomyces flocculus]], CCRC 12098 [[Streptomyces almquistii]], CCRC:10802, CCRC:12068 [[Streptomyces flocculus]], CCRC:12098 [[Streptomyces almquistii]], CCUG 33990, CECT 3077, CIP 104432, DSM 40313, DSM 40327 [[Streptomyces flocculus]], DSM 40447 [[Streptomyces almquistii]], DSM 40452 [[Streptomyces rangoonensis]], DSM 40933 [[Streptomyces griseus subsp. solvifaciens]], DSM 43284 [[Streptomyces gibsonii]], HAMBI 50 [[Streptomyces almquistii]], HUT 6613, HUT 6614 [[Streptomyces almquistii]], HUT 6615 [[Streptomyces flocculus]], HUT 6616 [[Streptomyces rangoonensis]], HUT 6617 [[Streptomyces gibsonii]], IFO 13014, IFO 13015 [[Streptomyces almquistii]], IFO 13041 [[Streptomyces flocculus]], IFO 13078 [[Streptomyces rangoonensis]], IFO 15415 [[Streptomyces gibsonii]], IFO 3710, IMET 40241, IMET 41357 [[Streptomyces rangoonensis]], IMET 43380 [[Streptomyces almquistii]], IMET 43522 [[Streptomyces flocculus]], IMET 7023 [[Streptomyces gibsonii]], IMRU 3004, ISP 5313, ISP 5327 [[Streptomyces flocculus]], ISP 5447 [[Streptomyces almquistii]], ISP 5452 [[Streptomyces rangoonensis]], JCM 4177, JCM 4450, JCM 4451 [[Streptomyces almquistii]], JCM 4476 [[Streptomyces flocculus]], JCM 4510 [[Streptomyces rangoonensis]], JCM 5061 [[Streptomyces gibsonii]], JCM 5079 [[Streptomyces griseus subsp. solvifaciens]], KCTC 9672 [[Streptomyces almquistii]], LMG 19912 [[Streptomyces gibsonii]], LMG:19912 [[Streptomyces gibsonii]], NBRC 13014, NBRC 13015 [[Streptomyces almquistii]], NBRC 13041 [[Streptomyces flocculus]], NBRC 13078 [[Streptomyces rangoonensis]], NBRC 15415 [[Streptomyces gibsonii]], NBRC 3710, NCIMB 9558, NCTC 4575 [[Streptomyces gibsonii]], NRRL 2960 [[Streptomyces flocculus]], NRRL B-12378 [[Streptomyces rangoonensis]], NRRL B-16595 [[Streptomyces rangoonensis]], NRRL B-2208, NRRL B-2465 [[Streptomyces flocculus]], NRRL B-2843 [[Streptomyces flocculus]], NRRL-ISP 5313, NRRL-ISP 5327 [[Streptomyces flocculus]], NRRL-ISP 5447 [[Streptomyces almquistii]], NRRL-ISP 5452 [[Streptomyces rangoonensis]], Nocardia gibsonii, Nocardia rangoonensis, Streptomyces almquistii, Streptomyces flocculus, Streptomyces gibsonii, Streptomyces griseus solvifaciens, Streptomyces griseus subsp. solvifaciens, Streptomyces rangoon, Streptomyces rangoonensis, Streptomyces sp. USC057, Streptotrix alba, VKM Ac-35

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMM06982.1	AMM07057.1	Salbus254_0427	Salbus254_0503	Alkanesulfonates transport system permease protein.	Binding-protein-dependent transport system innermembrane component.	0.953
AMM07057.1	AMM06982.1	Salbus254_0503	Salbus254_0427	Binding-protein-dependent transport system innermembrane component.	Alkanesulfonates transport system permease protein.	0.953
AMM07557.1	AMM07558.1	Salbus254_1007	Salbus254_1008	Transmembrane protein.	Transmembrane protein.	0.999
AMM07557.1	AMM07744.1	Salbus254_1007	Salbus254_1199	Transmembrane protein.	Sugar ABC transporter permease.	0.672
AMM07557.1	AMM10940.1	Salbus254_1007	Salbus254_4480	Transmembrane protein.	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name.	0.663
AMM07557.1	AMM10941.1	Salbus254_1007	Salbus254_4481	Transmembrane protein.	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name.	0.921
AMM07557.1	AMM12402.1	Salbus254_1007	Salbus254_5973	Transmembrane protein.	Transmembrane sugar transporter; Overlaps another CDS with the same product name.	0.969
AMM07557.1	AMM12403.1	Salbus254_1007	Salbus254_5974	Transmembrane protein.	Transmembrane sugar transporter; Overlaps another CDS with the same product name.	0.659
AMM07558.1	AMM07557.1	Salbus254_1008	Salbus254_1007	Transmembrane protein.	Transmembrane protein.	0.999
AMM07558.1	AMM07744.1	Salbus254_1008	Salbus254_1199	Transmembrane protein.	Sugar ABC transporter permease.	0.965
AMM07558.1	AMM10940.1	Salbus254_1008	Salbus254_4480	Transmembrane protein.	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name.	0.975
AMM07558.1	AMM10941.1	Salbus254_1008	Salbus254_4481	Transmembrane protein.	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name.	0.762
AMM07558.1	AMM12403.1	Salbus254_1008	Salbus254_5974	Transmembrane protein.	Transmembrane sugar transporter; Overlaps another CDS with the same product name.	0.972
AMM07744.1	AMM07557.1	Salbus254_1199	Salbus254_1007	Sugar ABC transporter permease.	Transmembrane protein.	0.672
AMM07744.1	AMM07558.1	Salbus254_1199	Salbus254_1008	Sugar ABC transporter permease.	Transmembrane protein.	0.965
AMM07744.1	AMM10941.1	Salbus254_1199	Salbus254_4481	Sugar ABC transporter permease.	Binding-protein-dependent transport system innermembrane component; Overlaps another CDS with the same product name.	0.973
AMM07744.1	AMM12402.1	Salbus254_1199	Salbus254_5973	Sugar ABC transporter permease.	Transmembrane sugar transporter; Overlaps another CDS with the same product name.	0.968
AMM07874.1	AMM08331.1	Salbus254_1332	Salbus254_1803	Glutamate transporter permease; Overlaps another CDS with the same product name.	ABC-type amino acid transport system, permease component.	0.862
AMM07874.1	AMM08519.1	Salbus254_1332	Salbus254_1997	Glutamate transporter permease; Overlaps another CDS with the same product name.	Amino acid ABC transporter integral membrane protein.	0.511
AMM07923.1	AMM08480.1	Salbus254_1385	Salbus254_1958	Oligopeptide transport system permease protein OppB.	Oligopeptide transport system permease protein OppC.	0.962

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