STRINGSTRING
adiA adiA ANB04737.1 ANB04737.1 ANB04791.1 ANB04791.1 rocD rocD patA patA ald ald proA proA proB proB gbh gbh ANB07066.1 ANB07066.1 speE speE yfmT yfmT proC proC ANB07964.1 ANB07964.1 aspC aspC dhaS dhaS ANB08729.1 ANB08729.1 ANB08730.1 ANB08730.1 aguA aguA ANB09640.1 ANB09640.1 ANB09642.1 ANB09642.1 ANB09643.1 ANB09643.1 ANB09644.1 ANB09644.1 aao aao ANB09724.1 ANB09724.1 ANB09827.1 ANB09827.1 amiB amiB cgc6 cgc6 speE-2 speE-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
adiAArginine decarboxylase; Biodegradative; catalyzes the formation of agmatine from arginine; Derived by automated computational analysis using gene prediction method: Protein Homology. (792 aa)
ANB04737.1Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)
ANB04791.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (440 aa)
rocDOrnithine--oxo-acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (406 aa)
patAAcetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
aldAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (462 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (428 aa)
proBGamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (368 aa)
gbhAgmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (323 aa)
ANB07066.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (553 aa)
yfmTAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (486 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (270 aa)
ANB07964.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
aspCAspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
dhaSBetaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
ANB08729.1Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
ANB08730.11-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
aguAAgmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
ANB09640.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
ANB09642.1FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
ANB09643.1Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family. (296 aa)
ANB09644.1Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family. (333 aa)
aaoAmino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
ANB09724.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
ANB09827.1Flavin-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
amiBAmidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
cgc6Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
speE-2Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (532 aa)
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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