STRINGSTRING
pcaB pcaB geoA geoA xylC xylC ANB04686.1 ANB04686.1 ANB05543.1 ANB05543.1 aldH aldH bedB bedB ANB05963.1 ANB05963.1 ANB06072.1 ANB06072.1 ANB06278.1 ANB06278.1 ANB06578.1 ANB06578.1 pobA pobA ubiX ubiX ANB08002.1 ANB08002.1 ANB08925.1 ANB08925.1 ANB09444.1 ANB09444.1 ANB09659.1 ANB09659.1 pcaB-2 pcaB-2 ANB09661.1 ANB09661.1 pcaH pcaH ANB10281.1 ANB10281.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pcaB3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
geoAAlcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
xylCBenzaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (484 aa)
ANB04686.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
ANB05543.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
aldHAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
bedBRieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
ANB05963.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
ANB06072.1Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
ANB06278.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
ANB06578.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
pobACatalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (224 aa)
ANB08002.14-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. (70 aa)
ANB08925.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
ANB09444.13-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
ANB09659.14-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
pcaB-23-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
ANB09661.1Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
pcaHProtocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
ANB10281.1Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
Your Current Organism:
Streptomyces ambofaciens
NCBI taxonomy Id: 1889
Other names: ATCC 23877, BCRC 11857, CBS 616.68, CCRC 11857, CCRC:11857, CECT 3101, DSM 40053, IFO 12836, ISP 5053, JCM 4204, JCM 4618, KCTC 9111, NBRC 12836, NRRL 2420, NRRL B-2516, NRRL-ISP 5053, S. ambofaciens
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