(7 nodes) Small ribosomal subunit network (Sulfolobus sp. A20)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps5	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. (214 aa)
	rps24e	30S ribosomal protein S24e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS24 family. (120 aa)
	rps19e	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (154 aa)
	rps17e	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family. (80 aa)
	rps3ae	30S ribosomal protein S3ae; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS1 family. (208 aa)
	rps19p	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (140 aa)
	AOL15885.1	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)

Your Current Organism:

Sulfolobus sp. A20

NCBI taxonomy Id: 1891280
Other names: S. sp. A20

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOL15885.1	rps17e	BFU36_03165	BFU36_04860	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
AOL15885.1	rps19e	BFU36_03165	BFU36_04065	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
AOL15885.1	rps19p	BFU36_03165	BFU36_02485	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
AOL15885.1	rps24e	BFU36_03165	BFU36_03645	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S24e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
AOL15885.1	rps3ae	BFU36_03165	BFU36_02345	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3ae; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
AOL15885.1	rps5	BFU36_03165	BFU36_02565	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.999
rps17e	AOL15885.1	BFU36_04860	BFU36_03165	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rps17e	rps19e	BFU36_04860	BFU36_04065	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rps17e	rps19p	BFU36_04860	BFU36_02485	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps17e	rps24e	BFU36_04860	BFU36_03645	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S24e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rps17e	rps3ae	BFU36_04860	BFU36_02345	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S3ae; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps17e	rps5	BFU36_04860	BFU36_02565	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.999
rps19e	AOL15885.1	BFU36_04065	BFU36_03165	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rps19e	rps17e	BFU36_04065	BFU36_04860	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rps19e	rps19p	BFU36_04065	BFU36_02485	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps19e	rps24e	BFU36_04065	BFU36_03645	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S24e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rps19e	rps3ae	BFU36_04065	BFU36_02345	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S3ae; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps19e	rps5	BFU36_04065	BFU36_02565	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.999
rps19p	AOL15885.1	BFU36_02485	BFU36_03165	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	30S ribosomal protein S26e; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rps19p	rps17e	BFU36_02485	BFU36_04860	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	30S ribosomal protein S17e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999