Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFW99003.1 | SFX04657.1 | SAMN02787144_100147 | SAMN02787144_1001278 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, alpha subunit. | 0.940 |
| SFW99003.1 | SFX16288.1 | SAMN02787144_100147 | SAMN02787144_1001741 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, delta subunit. | 0.970 |
| SFW99003.1 | SFX29892.1 | SAMN02787144_100147 | SAMN02787144_1002184 | DNA polymerase-3 subunit epsilon. | Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.516 |
| SFW99003.1 | SFX38278.1 | SAMN02787144_100147 | SAMN02787144_1002524 | DNA polymerase-3 subunit epsilon. | DNA helicase IV. | 0.426 |
| SFW99003.1 | SFX43471.1 | SAMN02787144_100147 | SAMN02787144_100365 | DNA polymerase-3 subunit epsilon. | Error-prone DNA polymerase; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.820 |
| SFW99003.1 | SFX49144.1 | SAMN02787144_100147 | SAMN02787144_1003328 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit epsilon. | 0.912 |
| SFW99003.1 | SFX78096.1 | SAMN02787144_100147 | SAMN02787144_1006123 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit alpha. | 0.940 |
| SFW99003.1 | SFX81570.1 | SAMN02787144_100147 | SAMN02787144_1006283 | DNA polymerase-3 subunit epsilon. | DNA polymerase III sliding clamp (beta) subunit, PCNA homolog. | 0.925 |
| SFW99003.1 | SFY23208.1 | SAMN02787144_100147 | SAMN02787144_1014108 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit delta'. | 0.934 |
| SFW99003.1 | SFY31120.1 | SAMN02787144_100147 | SAMN02787144_1017114 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.983 |
| SFW99003.1 | dnaX | SAMN02787144_100147 | SAMN02787144_102635 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.987 |
| SFW99003.1 | ligA | SAMN02787144_100147 | SAMN02787144_1005194 | DNA polymerase-3 subunit epsilon. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.408 |
| SFW99003.1 | ligA-2 | SAMN02787144_100147 | SAMN02787144_1012151 | DNA polymerase-3 subunit epsilon. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.408 |
| SFX00054.1 | SFX01380.1 | SAMN02787144_100199 | SAMN02787144_1001155 | Stress response protein SCP2. | Stress response protein SCP2. | 0.423 |
| SFX00054.1 | SFX03456.1 | SAMN02787144_100199 | SAMN02787144_1001236 | Stress response protein SCP2. | TerF vWA domain-containing protein. | 0.747 |
| SFX00054.1 | SFY39948.1 | SAMN02787144_100199 | SAMN02787144_102461 | Stress response protein SCP2. | Tellurium resistance protein TerD. | 0.774 |
| SFX00082.1 | SFX29892.1 | SAMN02787144_1001100 | SAMN02787144_1002184 | Hypothetical protein. | Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.503 |
| SFX00082.1 | SFX46514.1 | SAMN02787144_1001100 | SAMN02787144_1003206 | Hypothetical protein. | Putative RecB family exonuclease. | 0.503 |
| SFX00082.1 | SFX81570.1 | SAMN02787144_1001100 | SAMN02787144_1006283 | Hypothetical protein. | DNA polymerase III sliding clamp (beta) subunit, PCNA homolog. | 0.657 |
| SFX00082.1 | SFY31120.1 | SAMN02787144_1001100 | SAMN02787144_1017114 | Hypothetical protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.647 |
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