(38 nodes) Phosphopantetheine attachment site network (Kitasatospora aureofaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KOG67497.1	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2185 aa)
	KOG82242.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2394 aa)
	KOG80057.1	Nonribosomal peptide synthetase anabaenopeptin synthetase AptA1; Derived by automated computational analysis using gene prediction method: Protein Homology. (1053 aa)
	KOG80059.1	NRPS/PKS hybrid; Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)
	KOG80060.1	Non-ribosomal peptide synthetase module; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	KOG80061.1	Non-ribosomal peptide synthetase/polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (972 aa)
	KOG80146.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1030 aa)
	KOG80148.1	Surfactin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
	KOG78240.1	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
	KOG78286.1	Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1296 aa)
	KOG77820.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2531 aa)
	KOG77784.1	type-I PKS; Derived by automated computational analysis using gene prediction method: Protein Homology. (1133 aa)
	KOG75549.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (979 aa)
	KOG75553.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
	KOG75697.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1172 aa)
	KOG75059.1	Actinorhodin polyketide synthase acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	KOG74291.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3348 aa)
	KOG74292.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1556 aa)
	KOG74327.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)
	KOG73455.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (852 aa)
	KOG73385.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1060 aa)
	KOG73177.1	Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (840 aa)
	KOG73181.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
	KOG73315.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2400 aa)
	KOG73284.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
	KOG71255.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
	KOG71200.1	Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1053 aa)
	KOG71224.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
	KOG70970.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1005 aa)
	KOG70995.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1290 aa)
	KOG70971.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3099 aa)
	acpP	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (82 aa)
	KOG70672.1	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
	KOG70293.1	Amino acid adenylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1383 aa)
	KOG70397.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1483 aa)
	KOG68734.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
	KOG68249.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
	KOG67584.1	Methoxymalonate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)

Your Current Organism:

Kitasatospora aureofaciens

NCBI taxonomy Id: 1894
Other names: ATCC 10762, ATCC 23884, BCRC 11610, CBS 434.51, CBS 664.68, CCRC 11610, CCRC:11610, CECT 3206, CIP 57.11, DSM 40127, HAMBI 313, HUT 6048, HUT 6097, ICMP 499, IFO 12594, IFO 12843, IFO 3712, ISP 5127, JCM 4008, JCM 4624, K. aureofaciens, KACC 20180, LMG 5968, LMG:5968, NBRC 12594, NBRC 12843, NBRC 3712, NCAIM B.01479, NCIMB 8234, NRRL 2209, NRRL B-5404, NRRL-ISP 5127, NRRL-ISP:5127, NRRL:B:5404, RIA 57, Streptomyces aureifaciens, Streptomyces aureofaciens, Streptomyces aureofaciens subsp. aureofaciens, VKM Ac-771

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOG67497.1	KOG67584.1	ADK78_40565	ADK78_39850	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methoxymalonate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG68249.1	ADK78_40565	ADK78_37710	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG68734.1	ADK78_40565	ADK78_35250	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG70293.1	ADK78_40565	ADK78_29130	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid adenylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
KOG67497.1	KOG70397.1	ADK78_40565	ADK78_29235	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOG67497.1	KOG70672.1	ADK78_40565	ADK78_27695	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOG67497.1	KOG70970.1	ADK78_40565	ADK78_26845	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KOG67497.1	KOG70971.1	ADK78_40565	ADK78_26855	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOG67497.1	KOG70995.1	ADK78_40565	ADK78_26850	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
KOG67497.1	KOG71200.1	ADK78_40565	ADK78_26030	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KOG67497.1	KOG71255.1	ADK78_40565	ADK78_24415	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG73177.1	ADK78_40565	ADK78_16510	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
KOG67497.1	KOG73181.1	ADK78_40565	ADK78_16535	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG73284.1	ADK78_40565	ADK78_17190	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KOG67497.1	KOG73315.1	ADK78_40565	ADK78_17155	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOG67497.1	KOG73385.1	ADK78_40565	ADK78_16005	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
KOG67497.1	KOG73455.1	ADK78_40565	ADK78_16000	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
KOG67497.1	KOG74291.1	ADK78_40565	ADK78_14690	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KOG67497.1	KOG74292.1	ADK78_40565	ADK78_14700	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KOG67497.1	KOG74327.1	ADK78_40565	ADK78_14705	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999

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