Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOL95570.1 | AOL95571.1 | BG023_112661 | BG023_112662 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Protoporphyrin IX magnesium-chelatase. | 0.999 |
| AOL95570.1 | AOL95572.1 | BG023_112661 | BG023_112663 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Magnesium chelatase accessory protein. | 0.852 |
| AOL95570.1 | AOL95578.1 | BG023_112661 | BG023_112669 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.423 |
| AOL95570.1 | AOL95588.1 | BG023_112661 | BG023_112679 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Geranylgeranyl reductase. | 0.671 |
| AOL95570.1 | AOL95590.1 | BG023_112661 | BG023_112681 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Chlorophyll synthase. | 0.752 |
| AOL95570.1 | AOL95593.1 | BG023_112661 | BG023_112684 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 3-vinyl bacteriochlorophyllide hydratase. | 0.503 |
| AOL95570.1 | AOL95596.1 | BG023_112661 | BG023_112687 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Cobaltochelatase CobN subunit. | 0.996 |
| AOL95570.1 | AOL95598.1 | BG023_112661 | BG023_112689 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Mg-protoporphyrin IX methyltransferase. | 0.984 |
| AOL95570.1 | AOL95599.1 | BG023_112661 | BG023_112690 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | MFS transporter, BCD family, chlorophyll transporter. | 0.418 |
| AOL95570.1 | acsF | BG023_112661 | BG023_112695 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.521 |
| AOL95570.1 | bchB | BG023_112661 | BG023_112686 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Ferredoxin protochlorophyllide reductase subunitB; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.415 |
| AOL95570.1 | bchL | BG023_112661 | BG023_112688 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Ferredoxin protochlorophyllide reductase subunitL; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.448 |
| AOL95570.1 | bchN | BG023_112661 | BG023_112685 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | Ferredoxin protochlorophyllide reductase subunitN; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.633 |
| AOL95571.1 | AOL95570.1 | BG023_112662 | BG023_112661 | Protoporphyrin IX magnesium-chelatase. | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.999 |
| AOL95571.1 | AOL95572.1 | BG023_112662 | BG023_112663 | Protoporphyrin IX magnesium-chelatase. | Magnesium chelatase accessory protein. | 0.916 |
| AOL95571.1 | AOL95578.1 | BG023_112662 | BG023_112669 | Protoporphyrin IX magnesium-chelatase. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.848 |
| AOL95571.1 | AOL95579.1 | BG023_112662 | BG023_112670 | Protoporphyrin IX magnesium-chelatase. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.659 |
| AOL95571.1 | AOL95580.1 | BG023_112662 | BG023_112671 | Protoporphyrin IX magnesium-chelatase. | Chlorophyllide a reductase subunit Y. | 0.738 |
| AOL95571.1 | AOL95581.1 | BG023_112662 | BG023_112672 | Protoporphyrin IX magnesium-chelatase. | Chlorophyllide a reductase subunit Z. | 0.757 |
| AOL95571.1 | AOL95588.1 | BG023_112662 | BG023_112679 | Protoporphyrin IX magnesium-chelatase. | Geranylgeranyl reductase. | 0.881 |
page 1 of 27