STRINGSTRING
Mkms_1834 Mkms_1834 Mkms_1884 Mkms_1884 Mkms_1885 Mkms_1885 Mkms_1886 Mkms_1886 Mkms_1887 Mkms_1887 Mkms_1888 Mkms_1888 Mkms_1893 Mkms_1893 Mkms_2808 Mkms_2808 Mkms_2809 Mkms_2809 Mkms_2810 Mkms_2810
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mkms_1834PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase. (207 aa)
Mkms_1884PFAM: YCII-related; KEGG: mmc:Mmcs_1837 YCII-related. (111 aa)
Mkms_1885KEGG: mmc:Mmcs_1838 hypothetical protein. (307 aa)
Mkms_1886KEGG: mmc:Mmcs_1839 hypothetical protein. (214 aa)
Mkms_1887Biotin carboxylation domain protein; KEGG: mmc:Mmcs_1840 allophanate hydrolase; TIGRFAM: urea amidolyase related protein; biotin carboxylation domain protein; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein. (1205 aa)
Mkms_1888PFAM: Amidase; KEGG: mmc:Mmcs_1841 amidase. (578 aa)
Mkms_1893PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1846 isochorismatase hydrolase. (216 aa)
Mkms_2808PFAM: Amidase; KEGG: mmc:Mmcs_2764 amidase. (467 aa)
Mkms_2809PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_2765 isochorismatase hydrolase. (230 aa)
Mkms_2810PFAM: Xanthine/uracil/vitamin C permease; KEGG: mmc:Mmcs_2766 xanthine/uracil/vitamin C permease. (530 aa)
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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