(17 nodes) ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein network (Streptomyces clavuligerus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANW17678.1	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	ANW17679.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	ANW17680.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (396 aa)
	ANW20010.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	ANW21995.1	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (350 aa)
	ANW20011.1	Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	hmuV	Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (289 aa)
	ANW20451.1	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (356 aa)
	ANW20452.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	ANW20874.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ANW21378.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	ANW21379.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (350 aa)
	ANW21380.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (360 aa)
	fecE	Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	ANW21617.1	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (361 aa)
	ANW21618.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)
	ANW21619.1	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)

Your Current Organism:

Streptomyces clavuligerus

NCBI taxonomy Id: 1901
Other names: ATCC 27064, BCRC 11518, CBS 226.75, CCRC 11518, CCRC:11518, CECT 3125, DSM 40751, DSM 738, IFO 13307, IMET 43657, JCM 4710, KCTC 9095, NBRC 13307, NCIMB 12785, NCIMB 14335, NRRL 3585, S. clavuligerus, Streptomyces clavuligerus ATCC 27064, Streptomyces clavuligerus NRRL 3585, VKM Ac-602

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANW17678.1	ANW17679.1	BB341_05270	BB341_05275	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
ANW17678.1	ANW17680.1	BB341_05270	BB341_05280	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.954
ANW17678.1	ANW20011.1	BB341_05270	BB341_18205	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
ANW17678.1	ANW20451.1	BB341_05270	BB341_20690	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.741
ANW17678.1	ANW20874.1	BB341_05270	BB341_23015	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
ANW17678.1	ANW21379.1	BB341_05270	BB341_25810	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.659
ANW17678.1	ANW21618.1	BB341_05270	BB341_27095	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.646
ANW17678.1	ANW21995.1	BB341_05270	BB341_18200	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.781
ANW17678.1	fecE	BB341_05270	BB341_25820	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
ANW17678.1	hmuV	BB341_05270	BB341_20685	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.694
ANW17679.1	ANW17678.1	BB341_05275	BB341_05270	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
ANW17679.1	ANW17680.1	BB341_05275	BB341_05280	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.981
ANW17679.1	ANW20010.1	BB341_05275	BB341_18195	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
ANW17679.1	ANW20451.1	BB341_05275	BB341_20690	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.917
ANW17679.1	ANW20452.1	BB341_05275	BB341_20695	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
ANW17679.1	ANW21378.1	BB341_05275	BB341_25805	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
ANW17679.1	ANW21379.1	BB341_05275	BB341_25810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.921
ANW17679.1	ANW21380.1	BB341_05275	BB341_25815	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.839
ANW17679.1	ANW21617.1	BB341_05275	BB341_27090	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrichrome ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.841
ANW17679.1	ANW21618.1	BB341_05275	BB341_27095	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.918

page 1 of 11

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About