(10 nodes) Acyl-CoA dehydrogenase/oxidase C-terminal network (Betaproteobacteria bacterium GR1643)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APV49396.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
	APV49177.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	APV49033.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
	APV49023.1	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	APV49022.1	pimeloyl-CoA dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	fadE	acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (821 aa)
	APV51292.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)
	APV51240.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	BWI17_17035	Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
	APV51073.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)

Your Current Organism:

Betaproteobacteria bacterium GR1643

NCBI taxonomy Id: 1904640
Other names: B. bacterium GR16-43, Betaproteobacteria bacterium GR16-43, Nnibrrimonas geomnyongensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APV49022.1	APV49023.1	BWI17_04595	BWI17_04600	pimeloyl-CoA dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
APV49022.1	APV49033.1	BWI17_04595	BWI17_04650	pimeloyl-CoA dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
APV49023.1	APV49022.1	BWI17_04600	BWI17_04595	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	pimeloyl-CoA dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
APV49023.1	APV49033.1	BWI17_04600	BWI17_04650	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
APV49023.1	APV49396.1	BWI17_04600	BWI17_06700	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
APV49033.1	APV49022.1	BWI17_04650	BWI17_04595	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	pimeloyl-CoA dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
APV49033.1	APV49023.1	BWI17_04650	BWI17_04600	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
APV49033.1	APV49177.1	BWI17_04650	BWI17_05475	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APV49033.1	APV49396.1	BWI17_04650	BWI17_06700	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
APV49033.1	APV51073.1	BWI17_04650	BWI17_16105	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
APV49033.1	BWI17_17035	BWI17_04650	BWI17_17035	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APV49033.1	fadE	BWI17_04650	BWI17_01040	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
APV49177.1	APV49033.1	BWI17_05475	BWI17_04650	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APV49177.1	APV51073.1	BWI17_05475	BWI17_16105	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APV49177.1	BWI17_17035	BWI17_05475	BWI17_17035	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
APV49177.1	fadE	BWI17_05475	BWI17_01040	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
APV49396.1	APV49023.1	BWI17_06700	BWI17_04600	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
APV49396.1	APV49033.1	BWI17_06700	BWI17_04650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
APV51073.1	APV49033.1	BWI17_16105	BWI17_04650	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
APV51073.1	APV49177.1	BWI17_16105	BWI17_05475	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913