STRINGSTRING
ponB ponB bacA bacA XCC0490 XCC0490 ybjZ ybjZ ybjZ-2 ybjZ-2 wxcL wxcL XCC2784 XCC2784 gtrB-4 gtrB-4 orf89 orf89 bla-2 bla-2 mrcA mrcA dsbA dsbA dsbA-2 dsbA-2 norM norM dpm1 dpm1 XCC3863 XCC3863 XCC4211 XCC4211
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ponBPenicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (814 aa)
bacAUndecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (263 aa)
XCC0490Transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (297 aa)
ybjZABC transporter permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (402 aa)
ybjZ-2ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (430 aa)
wxcLGlycosyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (323 aa)
XCC2784Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (345 aa)
gtrB-4Glucosyl transferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (347 aa)
orf89Phage-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (118 aa)
bla-2Beta lactamase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (296 aa)
mrcAPenicillin-binding protein 1A; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (840 aa)
dsbADisulfide oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (216 aa)
dsbA-2Thiol:disulfide interchange protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (273 aa)
norMMultidrug efflux protein; Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (458 aa)
dpm1Dolichol-phosphate mannosyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (240 aa)
XCC3863Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark. (185 aa)
XCC4211Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (102 aa)
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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