STRINGSTRING
egl-2 egl-2 xynB-4 xynB-4 XCC4116 XCC4116 xynA xynA XCC4106 XCC4106 aguA aguA xynB-3 xynB-3 bglX-3 bglX-3 XCC3699 XCC3699 galA-2 galA-2 XCC3535 XCC3535 engXCA engXCA XCC3359 XCC3359 susB susB XCC3162 XCC3162 glgX-2 glgX-2 XCC3090 XCC3090 bga-2 bga-2 XCC2892 XCC2892 XCC2891 XCC2891 nahA nahA XCC2889 XCC2889 fucA1 fucA1 aglA-2 aglA-2 aglA aglA cgt cgt XCC2404 XCC2404 XCC2028 XCC2028 XCC1778 XCC1778 celD celD xylS xylS XCC1754 XCC1754 bglS bglS nagZ nagZ galA galA bga bga XCC1251 XCC1251 bglX-2 bglX-2 XCC1191 XCC1191 bglX bglX srfJ srfJ XCC0857 XCC0857 amy amy XCC0740 XCC0740 XCC0680 XCC0680 glgX glgX glgY glgY malQ malQ XCC0410 XCC0410 glgB2 glgB2 XCC0406 XCC0406 glgB1 glgB1 XCC0134 XCC0134 glgE glgE egl-3 egl-3 egl egl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
egl-2Cellulase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (350 aa)
xynB-4Xylanase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (330 aa)
XCC4116Beta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 2 family. (963 aa)
xynAIdentified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (385 aa)
XCC4106Glucan 1,4-beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (896 aa)
aguAAlpha-glucuronidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 67 family. (739 aa)
xynB-3Beta-xylosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (521 aa)
bglX-3Beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 3 family. (723 aa)
XCC3699Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (383 aa)
galA-2Arabinogalactan endo-1,4-beta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (333 aa)
XCC3535Cellulase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (590 aa)
engXCACellulase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (484 aa)
XCC3359Amylosucrase or alpha amylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (637 aa)
susBAlpha-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (654 aa)
XCC3162Glycosyl hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 2 family. (890 aa)
glgX-2Glycogen debranching enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 13 family. (709 aa)
XCC3090Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark. (328 aa)
bga-2Beta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (613 aa)
XCC2892Glucan 1,4-beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (888 aa)
XCC2891Beta-mannosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (893 aa)
nahABeta-hexosaminidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1090 aa)
XCC2889Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (353 aa)
fucA1alpha-L-fucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (561 aa)
aglA-2Alpha-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (538 aa)
aglAAlpha-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (692 aa)
cgtCyclomaltodextrin glucanotransferase (CGTase); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (592 aa)
XCC2404Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (543 aa)
XCC2028Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (654 aa)
XCC1778Mannan endo-1,4-beta-mannosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (333 aa)
celDGlucan 1,4-beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (870 aa)
xylSAlpha-xylosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 31 family. (945 aa)
XCC1754Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (555 aa)
bglSBeta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (747 aa)
nagZN-acetyl-beta-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (331 aa)
galAArabinogalactan endo-1,4-beta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (402 aa)
bgaBeta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 2 family. (926 aa)
XCC1251Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (642 aa)
bglX-2Beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (314 aa)
XCC1191alpha-L-arabinosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (508 aa)
bglXPeriplasmic beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (761 aa)
srfJGlycosyl hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 30 family. (548 aa)
XCC0857Xylanase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (405 aa)
amyAlpha-amylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (475 aa)
XCC0740Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (432 aa)
XCC0680Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark. (337 aa)
glgXGlycogen debranching enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 13 family. (720 aa)
glgYMaltooligosyltrehalose synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (872 aa)
malQ4-alpha-glucanotransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (643 aa)
XCC0410Maltooligosyltrehalose trehalohydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (585 aa)
glgB21,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (729 aa)
XCC0406Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (477 aa)
glgB11,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (724 aa)
XCC0134Trehalose synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1116 aa)
glgEAlpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (663 aa)
egl-3Cellulase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (354 aa)
eglCellulase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (349 aa)
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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