STRINGSTRING
W5S_0192 W5S_0192 W5S_0194 W5S_0194 W5S_0394 W5S_0394 W5S_0820 W5S_0820 W5S_0906 W5S_0906 W5S_0947 W5S_0947 W5S_2832 W5S_2832 W5S_3253 W5S_3253 W5S_4107 W5S_4107 metAS metAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_0192O-succinylhomoserine (Thiol)-lyase. (386 aa)
W5S_0194Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (310 aa)
W5S_0394Cystathionine beta-lyase. (396 aa)
W5S_0820Aminotransferase class V-fold PLP-dependent enzyme. (426 aa)
W5S_0906Cysteine synthase. (203 aa)
W5S_0947Cystathionine beta-lyase. (389 aa)
W5S_2832CoA-binding domain protein. (137 aa)
W5S_3253Putative siderophore biosynthesis protein SbnA. (358 aa)
W5S_4107Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1227 aa)
metASHomoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family. (309 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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