STRINGSTRING
W5S_0188 W5S_0188 W5S_0189 W5S_0189 W5S_0190 W5S_0190 W5S_0262 W5S_0262 W5S_0263 W5S_0263 W5S_0264 W5S_0264 W5S_0265 W5S_0265 W5S_0266 W5S_0266 W5S_0267 W5S_0267 W5S_0575 W5S_0575 W5S_0576 W5S_0576 W5S_0577 W5S_0577 W5S_0579 W5S_0579 W5S_0580 W5S_0580 W5S_0582 W5S_0582 W5S_0728 W5S_0728 W5S_0887 W5S_0887 W5S_0888 W5S_0888 W5S_0949 W5S_0949 W5S_1073 W5S_1073 W5S_1074 W5S_1074 W5S_1075 W5S_1075 btuF btuF W5S_1100 W5S_1100 W5S_1145 W5S_1145 W5S_1148 W5S_1148 W5S_1149 W5S_1149 W5S_1150 W5S_1150 W5S_1306 W5S_1306 W5S_1307 W5S_1307 W5S_1308 W5S_1308 W5S_1309 W5S_1309 W5S_1310 W5S_1310 dbpA dbpA W5S_1312 W5S_1312 W5S_1403 W5S_1403 W5S_1727 W5S_1727 W5S_1728 W5S_1728 W5S_1729 W5S_1729 W5S_1752 W5S_1752 W5S_1876 W5S_1876 W5S_2743 W5S_2743 W5S_2744 W5S_2744 W5S_2745 W5S_2745 hmuV hmuV btuD btuD btuC btuC W5S_2785 W5S_2785 W5S_2922 W5S_2922 W5S_2923 W5S_2923 W5S_2924 W5S_2924 W5S_2925 W5S_2925 W5S_2926 W5S_2926 W5S_2927 W5S_2927 W5S_3187 W5S_3187 W5S_3680 W5S_3680 W5S_3681 W5S_3681 W5S_3869 W5S_3869 W5S_3870 W5S_3870 W5S_3871 W5S_3871 W5S_3872 W5S_3872 W5S_3873 W5S_3873 W5S_3874 W5S_3874 W5S_3875 W5S_3875 W5S_3876 W5S_3876 W5S_3877 W5S_3877 W5S_3878 W5S_3878 W5S_3879 W5S_3879 W5S_4074 W5S_4074 W5S_4238 W5S_4238
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_0188Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (337 aa)
W5S_0189Iron chelate uptake ABC transporter, periplasmic solute-binding protein. (320 aa)
W5S_0190Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein. (270 aa)
W5S_0262Iron compound ABC transporter, periplasmic iron-binding protein, putative. (345 aa)
W5S_0263ABC transporter, permease protein, FecCD family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (331 aa)
W5S_0264Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein. (252 aa)
W5S_0265Methyltranfer_dom domain-containing protein. (273 aa)
W5S_0266ModD protein; Belongs to the NadC/ModD family. (282 aa)
W5S_0267Outer membrane receptor, probably tonB dependent. (663 aa)
W5S_05754'-phosphopantetheinyl transferase entD; Belongs to the P-Pant transferase superfamily. (238 aa)
W5S_0576Iha adhesin (Putative receptor). (338 aa)
W5S_0577R4-like protein. (295 aa)
W5S_0579Isochorismate synthase. (398 aa)
W5S_05802,3-dihydroxybenzoate-AMP ligase. (542 aa)
W5S_05822,3-dihydro-2,3-dihydroxybenzoate dehydrogenase. (260 aa)
W5S_0728Ferrichrome receptor FcuA. (759 aa)
W5S_0887RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. (173 aa)
W5S_0888Anti-FecI sigma factor, FecR. (315 aa)
W5S_0949FhuE receptor. (747 aa)
W5S_1073Ferrichrome transport ATP-binding protein FhuC. (310 aa)
W5S_1074Ferrichrome-binding periplasmic protein. (308 aa)
W5S_1075Ferrichrome ABC transporter, permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (672 aa)
btuFVitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. (275 aa)
W5S_1100IroE. (329 aa)
W5S_1145Solute-binding periplasmic protein of iron/siderophore ABC transporter. (375 aa)
W5S_1148ATP-binding component of hydroxymate-dependent iron transport. (266 aa)
W5S_1149ABC transporter permease (FecCD_family); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (360 aa)
W5S_1150Solute-binding periplasmic protein of iron/siderophore ABC transporter. (372 aa)
W5S_1306Alkanal monooxygenase (Bacterial liciferase alpha chain) like protein. (341 aa)
W5S_1307Iron chelating ABC transporter periplasmic-binding protein. (354 aa)
W5S_1308ABC transporter, permease protein, FecCD family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (339 aa)
W5S_1309Iron compounds ABC transporter, ATP-binding protein. (256 aa)
W5S_1310Molybdenum ABC transporter, periplasmic molybdate-binding protein. (244 aa)
dbpAATP-dependent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (490 aa)
W5S_1312Putative esterase of the alpha/beta hydrolase fold protein. (195 aa)
W5S_1403Outer membrane receptor for iron compound or colicin. (727 aa)
W5S_1727TonB-dependent heme receptor HasR. (892 aa)
W5S_1728Anti-FecI sigma factor, FecR. (317 aa)
W5S_1729ECF sigma factor protein; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)
W5S_1752Ferrienterobactin receptor. (728 aa)
W5S_1876Colicin I receptor. (709 aa)
W5S_2743Hemin transport protein HmuS. (349 aa)
W5S_2744Hemin-binding periplasmic protein. (272 aa)
W5S_2745Hemin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (334 aa)
hmuVHemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (265 aa)
btuDVitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (242 aa)
btuCVitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. (345 aa)
W5S_2785Iron chelating ABC transporter, substrate binding protein. (344 aa)
W5S_2922Atr protein. (270 aa)
W5S_2923Ferric enterobactin ABC transporter, ATP-binding protein FepC. (287 aa)
W5S_2924Ferrichrome transport system permease protein fhuG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)
W5S_2925Iron-uptake system permease protein feuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (329 aa)
W5S_2926YfiY (ABC transport system substrate-binding protein). (313 aa)
W5S_2927Ferric aerobactin receptor. (701 aa)
W5S_3187Heme receptor HasR. (728 aa)
W5S_3680Iron chelating ABC transporter, substrate binding protein. (358 aa)
W5S_3681Ferrichrome receptor FcuA. (727 aa)
W5S_3869Ferrienterobactin-binding periplasmic protein. (362 aa)
W5S_3870Enterobactin transporter EntS. (426 aa)
W5S_3871Ferric enterobactin transport system permease protein fepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (350 aa)
W5S_3872Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (339 aa)
W5S_3873Ferric enterobactin ABC transporter, ATP-binding protein FepC. (276 aa)
W5S_3874Pyoverdine sidechain peptide synthetase II, D-Asp-L-Thr component; Belongs to the ATP-dependent AMP-binding enzyme family. (2855 aa)
W5S_3875MbtH domain protein. (68 aa)
W5S_3876Enterochelin esterase. (449 aa)
W5S_3877TonB-dependent receptor plug. (297 aa)
W5S_3878Ferric iron siderophore receptor. (412 aa)
W5S_3879Vibriobactin-specific isochorismatase. (287 aa)
W5S_4074YhgE protein. (549 aa)
W5S_4238Ferrichrome receptor FcuA. (729 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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