(6 nodes) Cobalamin transport, and ABC transporter, permease protein, BtuC-like network (Pectobacterium parmentieri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5S_0188	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (337 aa)
	W5S_0189	Iron chelate uptake ABC transporter, periplasmic solute-binding protein. (320 aa)
	W5S_0190	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein. (270 aa)
	btuF	Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. (275 aa)
	btuD	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (242 aa)
	btuC	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. (345 aa)

Your Current Organism:

Pectobacterium parmentieri

NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5S_0188	W5S_0189	W5S_0188	W5S_0189	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	0.970
W5S_0188	W5S_0190	W5S_0188	W5S_0190	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	0.975
W5S_0188	btuD	W5S_0188	W5S_2754	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	0.513
W5S_0188	btuF	W5S_0188	W5S_1082	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.	0.839
W5S_0189	W5S_0188	W5S_0189	W5S_0188	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.970
W5S_0189	W5S_0190	W5S_0189	W5S_0190	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	0.965
W5S_0189	btuC	W5S_0189	W5S_2756	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	0.813
W5S_0189	btuD	W5S_0189	W5S_2754	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	0.541
W5S_0190	W5S_0188	W5S_0190	W5S_0188	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.975
W5S_0190	W5S_0189	W5S_0190	W5S_0189	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	0.965
W5S_0190	btuC	W5S_0190	W5S_2756	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	0.751
W5S_0190	btuF	W5S_0190	W5S_1082	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.	0.769
btuC	W5S_0189	W5S_2756	W5S_0189	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	0.813
btuC	W5S_0190	W5S_2756	W5S_0190	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein.	0.751
btuC	btuD	W5S_2756	W5S_2754	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	0.999
btuC	btuF	W5S_2756	W5S_1082	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.	0.990
btuD	W5S_0188	W5S_2754	W5S_0188	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.513
btuD	W5S_0189	W5S_2754	W5S_0189	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	Iron chelate uptake ABC transporter, periplasmic solute-binding protein.	0.541
btuD	btuC	W5S_2754	W5S_2756	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.	0.999
btuD	btuF	W5S_2754	W5S_1082	Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.	0.911

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