STRINGSTRING
W5S_1357 W5S_1357 W5S_1358 W5S_1358 W5S_1359 W5S_1359 W5S_1360 W5S_1360 W5S_1909 W5S_1909 artM artM W5S_1911 W5S_1911 W5S_1912 W5S_1912 W5S_1913 W5S_1913 W5S_3654 W5S_3654 W5S_4207 W5S_4207 W5S_4208 W5S_4208 W5S_4209 W5S_4209 W5S_4210 W5S_4210
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_1357Histidine ABC transporter substrate-binding protein HisJ; Belongs to the bacterial solute-binding protein 3 family. (259 aa)
W5S_1358Histidine ABC transporter, permease protein HisQ. (229 aa)
W5S_1359Histidine ABC transporter, permease protein HisM. (238 aa)
W5S_1360Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP. (257 aa)
W5S_1909Arginine-binding periplasmic protein 2; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artMArginine ABC transporter, permease protein ArtM. (222 aa)
W5S_1911Arginine ABC transporter, permease protein ArtQ. (238 aa)
W5S_1912Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
W5S_1913Arginine ABC transporter, ATP-binding protein. (249 aa)
W5S_3654Arginine transport system permease protein artQ. (254 aa)
W5S_4207Histidine ABC transporter, permease protein HisQ. (238 aa)
W5S_4208Arginine ABC transporter, permease protein ArtM. (244 aa)
W5S_4209Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP. (254 aa)
W5S_4210Amino acid ABC transporter, solute binding protein. (289 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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