STRINGSTRING
W5S_0245 W5S_0245 W5S_1360 W5S_1360 W5S_1913 W5S_1913 W5S_2468 W5S_2468 glnQ glnQ artP artP W5S_3602 W5S_3602 W5S_3655 W5S_3655 W5S_4209 W5S_4209 W5S_4340 W5S_4340 W5S_4342 W5S_4342
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_0245General L-amino acid transport ATP-binding subunit. (253 aa)
W5S_1360Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP. (257 aa)
W5S_1913Arginine ABC transporter, ATP-binding protein. (249 aa)
W5S_2468Glutamine transport ATP-binding protein GlnQ. (274 aa)
glnQGlutamine ABC transporter, ATP-binding protein. (240 aa)
artPGlutamate/aspartate ABC transporter, ATP-binding protein. (241 aa)
W5S_3602ATP-binding component of glutamine high-affinity transport system. (247 aa)
W5S_3655Amino acid ABC transporter ATP-binding protein. (240 aa)
W5S_4209Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP. (254 aa)
W5S_4340General L-amino acid ABC transporter ATP-binding protein. (266 aa)
W5S_4342Amino acid ABC transporter ATP-binding protein. (253 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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