(67 nodes) MFS transporter superfamily network (Pectobacterium parmentieri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5S_0085	Uncharacterized MFS-type transporter W5S_0085. (400 aa)
	W5S_0027	D-galactonate transporter. (429 aa)
	W5S_0005	Fosmidomycin resistance protein. (374 aa)
	W5S_0068	Galactarate permease GarP. (449 aa)
	W5S_4789	Methyl viologen resistance protein SmvA. (500 aa)
	W5S_4327	Tetracycline resistance protein. (174 aa)
	W5S_4326	Drug transport transmembrane protein. (216 aa)
	W5S_4306	Glycerol-3-phosphate transporter. (449 aa)
	W5S_4302	Uncharacterized protein. (111 aa)
	W5S_4286	Glucarate permease. (432 aa)
	W5S_4237	Siderophore staphylobactin biosynthesis protein SbnD. (417 aa)
	W5S_4037	2-ketogluconate transporter. (433 aa)
	W5S_4003	Proline/betaine transporter. (445 aa)
	W5S_3889	Purine ribonucleoside efflux pump nepI. (394 aa)
	W5S_3870	Enterobactin transporter EntS. (426 aa)
	W5S_3751	Lysophospholipid transporter lplT. (407 aa)
	W5S_3694	D-galactonate transporter. (450 aa)
	W5S_3679	Oligogalacturonide transporter. (519 aa)
	W5S_3631	Alpha-ketoglutarate permease. (426 aa)
	emrB	Multidrug efflux MFS transporter subunit EmrB; Belongs to the major facilitator superfamily. (511 aa)
	W5S_3618	Transporter ygaY. (406 aa)
	W5S_3456	Purine ribonucleoside efflux pump NepI. (398 aa)
	W5S_3307	Nucleoside permease NupG. (425 aa)
	W5S_3271	Inner membrane transport protein YajR. (454 aa)
	W5S_3265	AmpG like permease. (495 aa)
	W5S_3205	Inner membrane protein ybjJ. (389 aa)
	W5S_3045	Nucleoside permease NupG. (414 aa)
	W5S_2856	Cyanate transport protein CynX. (389 aa)
	W5S_2770	Purine ribonucleoside efflux pump nepI. (398 aa)
	W5S_2769	Paraquat resistance protein. (402 aa)
	W5S_2685	YfkF. (388 aa)
	W5S_2607	Oligosaccharide:H+ symporter. (410 aa)
	W5S_2598	Hexuronate transporter. (436 aa)
	W5S_2541	Nitrate/nitrite transporter. (462 aa)
	W5S_2479	Sugar (Glycoside-Pentoside-Hexuronide) transporter. (442 aa)
	W5S_2353	Inner membrane protein YbjJ. (401 aa)
	W5S_2291	Drug resistance transporter, EmrB/QacA family. (495 aa)
	W5S_2287	Inner membrane transport protein YnfM. (422 aa)
	dtpA	Dipeptide and tripeptide permease A; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily. (506 aa)
	W5S_2195	Bcr/CflA family efflux transporter. (399 aa)
	W5S_2113	Oxalate/formate antiporter. (407 aa)
	mdtH	Multidrug resistance protein MdtH. (401 aa)
	W5S_1936	Uncharacterized MFS-type transporter W5S_1936. (399 aa)
	W5S_1869	Sugar efflux transporter SetB. (392 aa)
	W5S_1858	Bcr/CflA family efflux transporter. (396 aa)
	W5S_1754	Bcr/CflA family efflux transporter. (418 aa)
	W5S_1739	Multidrug resistance protein mdtH. (415 aa)
	W5S_1687	Regulatory protein UhpC. (441 aa)
	lacY	Lactose permease. (418 aa)
	W5S_1394	Inner membrane protein YbjJ. (387 aa)
	mdtD	Putative multidrug resistance protein MdtD. (466 aa)
	W5S_1142	Putative 3-phenylpropionic acid transporter. (386 aa)
	W5S_1000	Transporter ygaY. (396 aa)
	W5S_0936	Multidrug resistance protein MdtG. (397 aa)
	W5S_0932	Inner membrane metabolite transport protein YdfJ. (457 aa)
	W5S_0925	Multidrug resistance protein mdtD. (458 aa)
	W5S_0837	ShiF. (403 aa)
	W5S_0827	Sugar (Glycoside-Pentoside-Hexuronide) transporter. (478 aa)
	W5S_0817	Oligogalacturonide transporter. (508 aa)
	W5S_0767	MFS transporter, metabolite:H+ symporter (MHS) family protein. (441 aa)
	W5S_0753	Lactose permease. (420 aa)
	W5S_0643	Hexuronate transporter. (433 aa)
	W5S_0578	Major facilitator superfamily MFS_1. (145 aa)
	W5S_0425	Transporter ygaY. (428 aa)
	W5S_0223	Shikimate and dehydroshikimate transport protein (MFS family). (201 aa)
	W5S_0222	Putative metabolite transporter, MFS superfamily protein. (284 aa)
	sotB	Probable sugar efflux transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. (395 aa)

Your Current Organism:

Pectobacterium parmentieri

NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5S_0222	W5S_0223	W5S_0222	W5S_0223	Putative metabolite transporter, MFS superfamily protein.	Shikimate and dehydroshikimate transport protein (MFS family).	0.988
W5S_0223	W5S_0222	W5S_0223	W5S_0222	Shikimate and dehydroshikimate transport protein (MFS family).	Putative metabolite transporter, MFS superfamily protein.	0.988
W5S_0223	W5S_4003	W5S_0223	W5S_4003	Shikimate and dehydroshikimate transport protein (MFS family).	Proline/betaine transporter.	0.624
W5S_0753	W5S_0817	W5S_0753	W5S_0817	Lactose permease.	Oligogalacturonide transporter.	0.446
W5S_0817	W5S_0753	W5S_0817	W5S_0753	Oligogalacturonide transporter.	Lactose permease.	0.446
W5S_0817	W5S_2607	W5S_0817	W5S_2607	Oligogalacturonide transporter.	Oligosaccharide:H+ symporter.	0.443
W5S_0817	lacY	W5S_0817	W5S_1681	Oligogalacturonide transporter.	Lactose permease.	0.446
W5S_0925	W5S_1858	W5S_0925	W5S_1858	Multidrug resistance protein mdtD.	Bcr/CflA family efflux transporter.	0.410
W5S_1754	W5S_4789	W5S_1754	W5S_4789	Bcr/CflA family efflux transporter.	Methyl viologen resistance protein SmvA.	0.455
W5S_1858	W5S_0925	W5S_1858	W5S_0925	Bcr/CflA family efflux transporter.	Multidrug resistance protein mdtD.	0.410
W5S_1858	W5S_4789	W5S_1858	W5S_4789	Bcr/CflA family efflux transporter.	Methyl viologen resistance protein SmvA.	0.433
W5S_2598	W5S_3679	W5S_2598	W5S_3679	Hexuronate transporter.	Oligogalacturonide transporter.	0.427
W5S_2607	W5S_0817	W5S_2607	W5S_0817	Oligosaccharide:H+ symporter.	Oligogalacturonide transporter.	0.443
W5S_2769	W5S_2770	W5S_2769	W5S_2770	Paraquat resistance protein.	Purine ribonucleoside efflux pump nepI.	0.769
W5S_2770	W5S_2769	W5S_2770	W5S_2769	Purine ribonucleoside efflux pump nepI.	Paraquat resistance protein.	0.769
W5S_2770	W5S_2856	W5S_2770	W5S_2856	Purine ribonucleoside efflux pump nepI.	Cyanate transport protein CynX.	0.410
W5S_2856	W5S_2770	W5S_2856	W5S_2770	Cyanate transport protein CynX.	Purine ribonucleoside efflux pump nepI.	0.410
W5S_3679	W5S_2598	W5S_3679	W5S_2598	Oligogalacturonide transporter.	Hexuronate transporter.	0.427
W5S_4003	W5S_0223	W5S_4003	W5S_0223	Proline/betaine transporter.	Shikimate and dehydroshikimate transport protein (MFS family).	0.624
W5S_4326	W5S_4327	W5S_4326	W5S_4327	Drug transport transmembrane protein.	Tetracycline resistance protein.	0.946

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