STRINGSTRING
W5S_2724 W5S_2724 W5S_1222 W5S_1222 W5S_0872 W5S_0872 W5S_0669 W5S_0669 W5S_0657 W5S_0657 W5S_0403 W5S_0403 W5S_2456 W5S_2456 W5S_2657 W5S_2657 W5S_1392 W5S_1392 W5S_2779 W5S_2779 W5S_3119 W5S_3119 W5S_4424 W5S_4424 W5S_1416 W5S_1416
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_2724PTS system, beta-glucoside-specific IIABC component. (633 aa)
W5S_1222PTS glucose transporter subunit IIBC. (113 aa)
W5S_0872PTS system, beta-glucoside-specific IIABC component. (644 aa)
W5S_0669PTS system, trehalose-specific IIB component. (245 aa)
W5S_0657PTS system, beta-glucoside-specific IIABC component. (669 aa)
W5S_0403PTS system, sucrose-specific IIBC component. (456 aa)
W5S_2456PTS system, arbutin-, cellobiose-, and salicin-specific, EIIBC component. (486 aa)
W5S_2657PTS system, beta-glucoside-specific IIABC component. (634 aa)
W5S_1392PTS system, trehalose-specific IIBC component. (472 aa)
W5S_2779PTS system, glucose-specific IIBC component. (477 aa)
W5S_3119PTS system, N-acetylglucosamine-specific IIBC component. (498 aa)
W5S_4424PTS system, beta-glucoside-specific IIABC component. (460 aa)
W5S_1416PTS system glucoside-specific EIICBA component. (513 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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