STRINGSTRING
W5S_0130 W5S_0130 W5S_0781 W5S_0781 W5S_0901 W5S_0901 W5S_1213 W5S_1213 W5S_1457 W5S_1457 W5S_1689 W5S_1689 W5S_2096 W5S_2096 W5S_2543 W5S_2543 W5S_2555 W5S_2555 W5S_2691 W5S_2691 W5S_3108 W5S_3108 phoB phoB W5S_4012 W5S_4012 pmrA pmrA W5S_4234 W5S_4234 W5S_4717 W5S_4717
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_0130Transcriptional regulatory protein CpxR. (232 aa)
W5S_0781Two component heavy metal response transcriptional regulator, winged helix family. (242 aa)
W5S_0901Transcriptional regulatory protein CpxR. (226 aa)
W5S_1213Two-component system response regulator BaeR. (242 aa)
W5S_1457Two-component system response regulator UvrY. (218 aa)
W5S_1689Transcriptional regulatory protein UhpA. (209 aa)
W5S_2096Two-component system response regulator PhoP. (229 aa)
W5S_2543Nitrate/nitrite response regulator protein NarL. (216 aa)
W5S_2555Two-component system response regulator RstA. (245 aa)
W5S_2691Nitrate/nitrite response regulator protein NarP. (210 aa)
W5S_3108Two-component system response regulator for high-affinity potassium transport system. (245 aa)
phoBPhosphate regulon transcriptional regulatory protein PhoB. (229 aa)
W5S_4012Two-component system response regulator ArcA. (238 aa)
pmrATranscriptional regulatory protein PmrA; Member of the two-component regulatory system PmrB/PmrA involved in regulation of virulence. Unphosphorylated PmrA represses extracellular enzyme genes. Phosphorylation of PmrA by PmrB relieves such repression, which leads to activation of extracellular enzyme genes. Phosphorylated PmrA seems to repress expression of the pmrCAB operon. (222 aa)
W5S_4234Transcriptional regulatory protein OmpR. (239 aa)
W5S_4717Two-component system response regulator QseB. (220 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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