STRINGSTRING
W5S_0120 W5S_0120 ugpE ugpE W5S_0246 W5S_0246 W5S_0247 W5S_0247 W5S_0249 W5S_0249 W5S_0530 W5S_0530 W5S_0531 W5S_0531 W5S_0748 W5S_0748 W5S_0749 W5S_0749 W5S_0765 W5S_0765 W5S_0865 W5S_0865 W5S_0866 W5S_0866 W5S_0896 W5S_0896 W5S_0897 W5S_0897 W5S_0943 W5S_0943 W5S_0944 W5S_0944 W5S_0961 W5S_0961 W5S_1055 W5S_1055 W5S_1088 W5S_1088 W5S_1089 W5S_1089 W5S_1225 W5S_1225 W5S_1226 W5S_1226 W5S_1240 W5S_1240 pstA pstA W5S_1264 W5S_1264 W5S_1358 W5S_1358 W5S_1359 W5S_1359 W5S_1425 W5S_1425 W5S_1685 W5S_1685 W5S_4741 W5S_4741 W5S_1709 W5S_1709 W5S_1714 W5S_1714 W5S_1737 W5S_1737 W5S_1745 W5S_1745 W5S_1861 W5S_1861 W5S_1862 W5S_1862 W5S_1905 W5S_1905 W5S_1906 W5S_1906 artM artM W5S_1911 W5S_1911 W5S_2090 W5S_2090 W5S_2091 W5S_2091 W5S_2141 W5S_2141 W5S_2142 W5S_2142 W5S_2231 W5S_2231 W5S_2232 W5S_2232 W5S_2467 W5S_2467 W5S_2507 W5S_2507 W5S_2515 W5S_2515 W5S_2516 W5S_2516 W5S_4779 W5S_4779 W5S_2584 W5S_2584 W5S_2585 W5S_2585 W5S_2664 W5S_2664 W5S_2862 W5S_2862 W5S_2904 W5S_2904 W5S_4778 W5S_4778 W5S_2956 W5S_2956 W5S_2957 W5S_2957 W5S_2974 W5S_2974 modB modB W5S_3138 W5S_3138 W5S_3139 W5S_3139 W5S_3603 W5S_3603 W5S_3604 W5S_3604 W5S_3613 W5S_3613 W5S_3641 W5S_3641 W5S_3654 W5S_3654 W5S_3810 W5S_3810 W5S_3811 W5S_3811 W5S_3949 W5S_3949 W5S_4199 W5S_4199 W5S_4200 W5S_4200 W5S_4207 W5S_4207 W5S_4208 W5S_4208 pstC pstC W5S_4338 W5S_4338 W5S_4339 W5S_4339 W5S_4772 W5S_4772 W5S_4343 W5S_4343 W5S_4484 W5S_4484 W5S_4551 W5S_4551 W5S_4552 W5S_4552 W5S_4635 W5S_4635 W5S_4740 W5S_4740 W5S_4636 W5S_4636 W5S_0019 W5S_0019 W5S_0020 W5S_0020 W5S_0030 W5S_0030 W5S_0049 W5S_0049 W5S_0050 W5S_0050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_0120Sn-glycerol-3-phosphate transport system permease protein UgpA. (295 aa)
ugpESn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
W5S_0246Inner membrane amino-acid ABC transporter permease protein yhdY. (364 aa)
W5S_0247Glutamate/glutamine/aspartate/asparagine transport system permease protein. (392 aa)
W5S_0249L-cystine ABC transporter, permease protein. (221 aa)
W5S_0530Glutathione transport system permease protein GsiD. (288 aa)
W5S_0531Glutathione transport system permease protein gsiC. (318 aa)
W5S_0748Sugar ABC transporter permease. (290 aa)
W5S_0749Glycerol-3-phosphate ABC transporter, permease protein. (299 aa)
W5S_0765Methionine ABC transporter permease protein. (222 aa)
W5S_0865Sugar ABC transporter permease. (293 aa)
W5S_0866L-arabinose transport system permease protein AraQ. (270 aa)
W5S_0896Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (277 aa)
W5S_0897Sulfate ABC transporter, inner membrane subunit CysW. (288 aa)
W5S_0943Amino acid transporter (ABC superfamily, atp_bind and membrane). (487 aa)
W5S_0944Polar amino acid ABC transporter, inner membrane subunit. (248 aa)
W5S_0961Polyamine ABC transporter, permease protein. (239 aa)
W5S_1055Ferric iron ABC transporter, permease protein. (561 aa)
W5S_1088Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (270 aa)
W5S_1089Sulfate ABC transporter, inner membrane subunit CysW. (293 aa)
W5S_1225Maltose/maltodextrin transport system. (282 aa)
W5S_1226ABC maltose/maltodextrin transporter, permease subunit. (434 aa)
W5S_1240Phosphate transport system permease protein PstC. (722 aa)
pstAPhosphate transport system permease protein PstA. (548 aa)
W5S_1264Iron(III)-transport system permease. (525 aa)
W5S_1358Histidine ABC transporter, permease protein HisQ. (229 aa)
W5S_1359Histidine ABC transporter, permease protein HisM. (238 aa)
W5S_1425Nitrate ABC transporter, inner membrane subunit. (304 aa)
W5S_1685Ferric transport system permease protein fbpB. (692 aa)
W5S_4741annotation not available (226 aa)
W5S_1709Aliphatic sulfonates transport permease protein. (288 aa)
W5S_1714Taurine ABC transporter, permease protein. (244 aa)
W5S_1737Transport system membrane protein. (592 aa)
W5S_1745Sulfate ester transporter, permease component. (533 aa)
W5S_1861Inner membrane ABC transporter permease protein YejE. (341 aa)
W5S_1862Inner membrane ABC transporter permease protein YejB. (365 aa)
W5S_1905Putrescine ABC transporter, permease protein PotH. (324 aa)
W5S_1906Putrescine ABC transporter, permease protein PotI. (281 aa)
artMArginine ABC transporter, permease protein ArtM. (222 aa)
W5S_1911Arginine ABC transporter, permease protein ArtQ. (238 aa)
W5S_2090Spermidine/putrescine transport system permease protein PotC. (258 aa)
W5S_2091Spermidine/putrescine transport system permease protein PotB. (286 aa)
W5S_2141Oligogalacturonide ABC tansporter, permease protein. (301 aa)
W5S_2142Oligogalacturonide ABC tansporter, permease protein. (296 aa)
W5S_2231Oligopeptide ABC transporter, permease protein OppB. (306 aa)
W5S_2232Oligopeptide ABC transporter, permease protein OppC. (302 aa)
W5S_2467L-cystine ABC transporter, permease protein. (321 aa)
W5S_2507Methionine ABC transporter permease protein. (219 aa)
W5S_2515Polyamine ABC transporter, permease protein. (272 aa)
W5S_2516Polyamine ABC transporter, permease protein. (422 aa)
W5S_4779L-cystine ABC transporter, permease protein. (242 aa)
W5S_2584Peptide transport system permease protein SapB. (321 aa)
W5S_2585Peptide transport system permease protein SapC. (296 aa)
W5S_2664Taurine uptake ABC transporter, permease protein. (271 aa)
W5S_2862Glutamine ABC transporter, permease protein. (219 aa)
W5S_29042-aminoethylphosphonate ABC transport system, permease protein. (550 aa)
W5S_4778Glutamate/aspartate ABC transporter, permease protein GltJ. (247 aa)
W5S_2956Glutathione transport system permease protein GsiD. (301 aa)
W5S_2957Glutathione transport system permease protein gsiC. (306 aa)
W5S_2974Ferric iron uptake ABC transporter (FeT) family, permease protein. (506 aa)
modBMolybdenum transport system permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (228 aa)
W5S_3138Glutamate/aspartate ABC transporter, permease protein GltJ. (246 aa)
W5S_3139Glutamate/aspartate ABC transporter, permease protein GltK. (224 aa)
W5S_3603Polar amino acid ABC transporter, inner membrane subunit. (217 aa)
W5S_3604Polar amino acid ABC transporter, inner membrane subunit. (222 aa)
W5S_3613Glycine betaine/L-proline transport system permease protein ProW. (400 aa)
W5S_3641D-methionine ABC transporter, permease protein. (217 aa)
W5S_3654Arginine transport system permease protein artQ. (254 aa)
W5S_3810Sn-glycerol-3-phosphate-binding protein. (349 aa)
W5S_3811Sugar-transport integral membrane protein ABC transporter UspA. (332 aa)
W5S_3949Thiamine/thiamine pyrophosphate ABC transporter, permease protein. (535 aa)
W5S_4199Inner membrane ABC transporter permease protein yddQ. (307 aa)
W5S_4200Dipeptide ABC transporter, permease protein DppB. (346 aa)
W5S_4207Histidine ABC transporter, permease protein HisQ. (238 aa)
W5S_4208Arginine ABC transporter, permease protein ArtM. (244 aa)
pstCPhosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (319 aa)
W5S_4338Glutamate/glutamine/aspartate/asparagine transport system permease protein. (434 aa)
W5S_4339Inner membrane amino-acid ABC transporter permease protein yhdY. (369 aa)
W5S_4772Phosphate transport system permease protein PstA. (295 aa)
W5S_4343Arginine transport system permease protein artQ. (223 aa)
W5S_4484Sulfate ester ABC transporter permease protein. (536 aa)
W5S_4551Glutathione transport system permease protein gsiC. (306 aa)
W5S_4552Glutathione transport system permease protein GsiD. (299 aa)
W5S_4635Glutathione transport system permease protein gsiC. (314 aa)
W5S_4740Putative glycine betaine/carnitine/choline ABC transporter opuCB. (214 aa)
W5S_4636Inner membrane ABC transporter permease protein yddQ. (286 aa)
W5S_0019Dipeptide ABC transporter, permease protein DppB. (325 aa)
W5S_0020Peptide ABC transporter permease component. (302 aa)
W5S_0030Aliphatic sulfonates ABC transporter, permease protein. (264 aa)
W5S_0049Dipeptide ABC transporter, permease protein DppB. (339 aa)
W5S_0050Dipeptide ABC transporter, permease protein DppC. (300 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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