STRINGSTRING
CC_0092 CC_0092 CC_0135 CC_0135 CC_0136 CC_0136 CC_0164 CC_0164 CC_0165 CC_0165 pssY pssY CC_0169 CC_0169 CC_0209 CC_0209 CC_0232 CC_0232 CC_0233 CC_0233 CC_0234 CC_0234 CC_0306 CC_0306 CC_0466 CC_0466 CC_0468 CC_0468 CC_0469 CC_0469 hfsI hfsI CC_0631 CC_0631 CC_0632 CC_0632 CC_0633 CC_0633 CC_0634 CC_0634 CC_0635 CC_0635 CC_0636 CC_0636 CC_0637 CC_0637 CC_0737 CC_0737 CC_0754 CC_0754 CC_0755 CC_0755 CC_0756 CC_0756 CC_0948 CC_0948 gmd gmd CC_1011 CC_1011 per per CC_1013 CC_1013 CC_1014 CC_1014 CC_1055 CC_1055 CC_1116 CC_1116 CC_1117 CC_1117 CC_1140 CC_1140 CC_1141 CC_1141 CC_1146 CC_1146 CC_1244 CC_1244 CC_1382 CC_1382 CC_1397 CC_1397 CC_1418 CC_1418 CC_1456 CC_1456 CC_1486 CC_1486 CC_1868 CC_1868 anmK anmK CC_1871 CC_1871 CC_1872 CC_1872 bacA bacA CC_1958 CC_1958 CC_2015 CC_2015 CC_2071 CC_2071 CC_2072 CC_2072 CC_2073 CC_2073 CC_2247 CC_2247 CC_2248 CC_2248 CC_2249 CC_2249 CC_2264 CC_2264 CC_2276 CC_2276 CC_2277 CC_2277 CC_2278 CC_2278 CC_2296 CC_2296 CC_2297 CC_2297 CC_2300 CC_2300 CC_2323 CC_2323 CC_2348 CC_2348 CC_2378 CC_2378 CC_2379 CC_2379 CC_2380 CC_2380 CC_2381 CC_2381 CC_2382 CC_2382 CC_2383 CC_2383 PssZ PssZ CC_2385 CC_2385 hfsE hfsE hfsF hfsF hfsG hfsG hfsH hfsH hfsC hfsC hfsB hfsB hfsA hfsA hfsD hfsD hfaA hfaA hfaB hfaB CC_2645 CC_2645 CC_2853 CC_2853 CC_2854 CC_2854 CC_2855 CC_2855 CC_2856 CC_2856 CC_2857 CC_2857 CC_2858 CC_2858 CC_2859 CC_2859 CC_2860 CC_2860 CC_2868 CC_2868 CC_3020 CC_3020 CC_3022 CC_3022 CC_3023 CC_3023 CC_3186 CC_3186 CC_3187 CC_3187 CC_3188 CC_3188 CC_3207 CC_3207 CC_3210 CC_3210 CC_3344 CC_3344 CC_3345 CC_3345 CC_3575 CC_3575 CC_3611 CC_3611 CC_3615 CC_3615 CC_3617 CC_3617 CC_3618 CC_3618 CC_3629 CC_3629 CC_3632 CC_3632 CC_3633 CC_3633 CC_3637 CC_3637 CC_3689 CC_3689
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CC_0092UDP-glucose 4-epimerase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)
CC_0135Conserved hypothetical protein; Identified by Glimmer2; putative. (142 aa)
CC_0136Conserved hypothetical protein; Identified by Glimmer2; putative. (239 aa)
CC_0164Conserved hypothetical protein; Identified by Glimmer2; putative. (739 aa)
CC_0165Hypothetical protein; Identified by Glimmer2; putative. (641 aa)
pssYExopolysaccharide production protein PssY; Is likely the initiating enzyme for holdfast polysaccharide synthesis. Catalyzes the transfer of the glucose-1-phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl-pyrophosphoryl- undecaprenol (Glc-PP-C55). Also possesses a weak galactose-1-P transferase activity; Belongs to the bacterial sugar transferase family. (267 aa)
CC_0169Conserved hypothetical protein; Identified by Glimmer2; putative. (186 aa)
CC_0209Conserved hypothetical protein; Identified by Glimmer2; putative. (524 aa)
CC_0232Hypothetical protein; Identified by Glimmer2; putative. (138 aa)
CC_0233Flagellin modification protein FlmA; Identified by match to protein family HMM. (363 aa)
CC_0234Flagellin modification protein FlmB; Identified by match to PFAM protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. (402 aa)
CC_0306Hypothetical protein; Identified by Glimmer2; putative. (221 aa)
CC_0466Hypothetical protein; Identified by Glimmer2; putative. (121 aa)
CC_0468Hypothetical protein; Identified by Glimmer2; putative. (559 aa)
CC_0469Identified by match to protein family HMM. (245 aa)
hfsIHfsI; Identified by Glimmer2; putative. (440 aa)
CC_0631Hypothetical protein; Identified by Glimmer2; putative. (394 aa)
CC_0632Hypothetical protein; Identified by Glimmer2; putative. (350 aa)
CC_0633Conserved hypothetical protein; Identified by Glimmer2; putative. (818 aa)
CC_0634ABC transporter, ATP-binding subunit; Identified by match to protein family HMM. (250 aa)
CC_0635ABC-2 type transporter; Identified by match to PFAM protein family HMM PF01061. (263 aa)
CC_0636Hypothetical protein; Identified by Glimmer2; putative. (267 aa)
CC_0637Transcriptional regulator, AraC family; Identified by match to protein family HMM. (335 aa)
CC_0737Identified by match to protein family HMM. (367 aa)
CC_0754Hypothetical protein; Identified by Glimmer2; putative. (318 aa)
CC_0755Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM. (399 aa)
CC_0756Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM. (455 aa)
CC_0948Hypothetical protein; Identified by Glimmer2; putative. (360 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (325 aa)
CC_1011Identified by match to protein family HMM. (215 aa)
perPerosamine synthetase; Catalyzes the synthesis of GDP-perosamine from GDP-4-keto-6- deoxy-D-mannose and L-glutamate. Can use only L-glutamate as amino donor. In vitro, can also use GDP-4-keto-3,6-dideoxymannose to produce GDP-3-deoxyperosamine. Involved in the formation of S-LPS, which is required for attachment of the protein S-layer to the outer membrane surface. (371 aa)
CC_1013Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. (345 aa)
CC_1014Glycosyl transferase, group 1 family protein LpsE; Identified by match to protein family HMM. (345 aa)
CC_1055Conserved hypothetical protein; Identified by Glimmer2; putative. (286 aa)
CC_1116Chorismate mutase, putative; Identified by match to PFAM protein family HMM PF01817. (121 aa)
CC_1117Transcriptional regulator, LysR family; Identified by match to protein family HMM; Belongs to the LysR transcriptional regulatory family. (340 aa)
CC_1140dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (300 aa)
CC_1141Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (289 aa)
CC_1146Identified by match to protein family HMM. (315 aa)
CC_1244Hypothetical protein; Identified by Glimmer2; putative. (398 aa)
CC_1382Aminotransferase, class I; Identified by match to protein family HMM. (406 aa)
CC_1397Phospho-2-dehydro-3-deoxyheptonate aldolase, class I; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (369 aa)
CC_1418Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (378 aa)
CC_1456Flagellin modification protein FlmH; Identified by match to protein family HMM. (196 aa)
CC_1486Conserved hypothetical protein; Identified by Glimmer2; putative. (186 aa)
CC_1868Hypothetical protein; Identified by Glimmer2; putative. (184 aa)
anmKConserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (386 aa)
CC_1871Bacterioferritin comigratory protein; Identified by match to PFAM protein family HMM PF00578. (153 aa)
CC_1872Peptidase, M23/M37 family; Identified by match to protein family HMM. (383 aa)
bacAConserved hypothetical protein; Identified by Glimmer2; putative. (161 aa)
CC_1958Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM. (402 aa)
CC_2015Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM. (305 aa)
CC_2071Hypothetical protein; Identified by Glimmer2; putative. (219 aa)
CC_2072Identified by match to PFAM protein family HMM PF00850. (296 aa)
CC_2073Acetyltransferase, GNAT family; Identified by match to protein family HMM. (178 aa)
CC_2247Hypothetical protein; Identified by Glimmer2; putative. (46 aa)
CC_2248Peptidase, M23/M37 family; Identified by match to protein family HMM. (266 aa)
CC_2249Chemotaxis protein cheYIII; Identified by match to protein family HMM. (172 aa)
CC_2264Identified by match to protein family HMM. (498 aa)
CC_2276Hypothetical protein; Identified by Glimmer2; putative. (334 aa)
CC_2277Identified by match to protein family HMM. (306 aa)
CC_2278Hypothetical protein; Identified by Glimmer2; putative. (401 aa)
CC_2296Hypothetical protein; Identified by Glimmer2; putative. (222 aa)
CC_2297Peptidase, M23/M37 family; Identified by match to protein family HMM. (298 aa)
CC_2300Phospho-2-dehydro-3-deoxyheptonate aldolase, class II; Identified by match to PFAM protein family HMM PF01474. (459 aa)
CC_2323Hypothetical protein; Identified by Glimmer2; putative. (377 aa)
CC_2348Hypothetical protein; Identified by Glimmer2; putative. (64 aa)
CC_2378Identified by match to protein family HMM. (324 aa)
CC_2379UDP-glucose 6-dehydrogenase; Identified by match to PFAM protein family HMM PF00984. (435 aa)
CC_2380Hypothetical protein; Identified by Glimmer2; putative. (139 aa)
CC_2381Hypothetical protein; Identified by Glimmer2; putative. (36 aa)
CC_2382UDP-glucose 6-dehydrogenase; Identified by match to PFAM protein family HMM PF00984. (435 aa)
CC_2383UDP-glucose 4-epimerase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)
PssZExopolysaccharide production protein Pss; Similar to SP:P10498 GB:X12568 PID:581513; identified by sequence similarity; putative. (188 aa)
CC_2385Hypothetical protein; Identified by Glimmer2; putative. (90 aa)
hfsEHfsE; Identified by Glimmer2; putative. (512 aa)
hfsFHfsF; Identified by match to protein family HMM. (480 aa)
hfsGIdentified by match to protein family HMM. (309 aa)
hfsHHfsH; Identified by match to PFAM protein family HMM PF01522. (257 aa)
hfsCHfsC; Identified by Glimmer2; putative. (422 aa)
hfsBHfsB; Identified by Glimmer2; putative. (233 aa)
hfsAHfsA; Identified by Glimmer2; putative. (501 aa)
hfsDHfsD; Identified by Glimmer2; putative. (239 aa)
hfaAhfaA protein; Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces. (147 aa)
hfaBhfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC. (337 aa)
CC_2645Hypothetical protein; Identified by Glimmer2; putative. (101 aa)
CC_2853Flagellin modification protein FlmC; Identified by match to protein family HMM. (238 aa)
CC_2854Flagellin modification protein FlmD; Similar to PID:903375; identified by sequence similarity; putative. (329 aa)
CC_2855Hypothetical protein; Identified by Glimmer2; putative. (121 aa)
CC_2856Flagellin modification protein FlmE; Similar to PID:903376; identified by sequence similarity; putative. (215 aa)
CC_2857Flagellin modification protein FlmF; Similar to PID:903377; identified by sequence similarity; putative. (420 aa)
CC_2858Conserved hypothetical protein; Identified by Glimmer2; putative. (235 aa)
CC_2859Hypothetical protein; Identified by Glimmer2; putative. (41 aa)
CC_2860Glycosyl transferase, putative; Similar to GB:L19659 GB:Z19550 SP:Q06430 PID:1315909 PID:296532; identified by sequence similarity; putative. (322 aa)
CC_2868neuB protein, putative; Similar to GB:U05248 PID:454081; identified by sequence similarity; putative. (356 aa)
CC_3020Hypothetical protein; Identified by Glimmer2; putative. (58 aa)
CC_3022Conserved hypothetical protein; Identified by Glimmer2; putative. (232 aa)
CC_3023Hypothetical protein; Identified by Glimmer2; putative. (146 aa)
CC_3186Conserved hypothetical protein; Identified by Glimmer2; putative. (158 aa)
CC_3187Hypothetical protein; Identified by Glimmer2; putative; Belongs to the DegT/DnrJ/EryC1 family. (332 aa)
CC_31884-coumarate-CoA ligase, putative; Identified by match to protein family HMM. (517 aa)
CC_3207Hypothetical protein; Identified by Glimmer2; putative. (138 aa)
CC_3210Conserved hypothetical protein; Identified by Glimmer2; putative. (627 aa)
CC_3344Conserved hypothetical protein; Identified by Glimmer2; putative. (281 aa)
CC_3345Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM. (363 aa)
CC_3575Conserved hypothetical protein; Identified by Glimmer2; putative. (234 aa)
CC_3611Identified by match to PFAM protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. (386 aa)
CC_3615dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (293 aa)
CC_3617Mannose-6-phosphate isomerase; Similar to GB:M96584 SP:P29954 PID:152407; identified by sequence similarity; putative. (386 aa)
CC_3618Mannose-1-phosphate guanylyltransferase; Identified by match to protein family HMM; Belongs to the mannose-6-phosphate isomerase type 2 family. (436 aa)
CC_3629dTDP-D-glucose-4,6-dehydratase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (356 aa)
CC_3632Identified by match to protein family HMM. (341 aa)
CC_3633dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
CC_3637UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM. (291 aa)
CC_3689Hypothetical protein; Identified by Glimmer2; putative. (361 aa)
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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