STRINGSTRING
hutU hutU CC_0958 CC_0958 hutH hutH hutI hutI CC_0961 CC_0961 CC_0962 CC_0962
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (554 aa)
CC_0958Formiminoglutamase; Similar to GP:2642341; identified by sequence similarity; putative. (271 aa)
hutHHistidine ammonia-lyase; Identified by match to protein family HMM; Belongs to the PAL/histidase family. (509 aa)
hutIImidazolonepropionase; Identified by match to protein family HMM; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (401 aa)
CC_0961Chlorohydrolase; Identified by match to PFAM protein family HMM PF01685. (459 aa)
CC_0962Histidine utilization repressor; Identified by match to protein family HMM. (235 aa)
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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