(39 nodes) Oxidoreductase activity, acting on the CH-CH group of donors network (Caulobacter vibrioides CB15)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	CC_1310	Identified by match to PFAM protein family HMM PF00441. (404 aa)
	CC_3761	Conserved hypothetical protein; Identified by Glimmer2; putative. (154 aa)
	CC_3717	Enoyl-(acyl-carrier-protein) reductase; Identified by match to protein family HMM. (278 aa)
	dapB	Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (257 aa)
	CC_3529	Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to PFAM protein family HMM PF01127. (135 aa)
	CC_3528	Succinate dehydrogenase, hydrophobic membrane anchor protein, putative; Similar to GP:3273340; identified by sequence similarity; putative. (139 aa)
	SdhA	Succinate dehydrogenase, flavoprotein subunit; Identified by match to protein family HMM; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (596 aa)
	SdhB	Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
	CC_3454	Identified by match to PFAM protein family HMM PF00441. (435 aa)
	CC_3393	Identified by match to PFAM protein family HMM PF00441. (603 aa)
	CC_3110	Conserved hypothetical protein; Identified by Glimmer2; putative. (310 aa)
	CC_3087	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441. (564 aa)
	CC_2577	Conserved hypothetical protein; Identified by Glimmer2; putative. (204 aa)
	CC_2479	Identified by match to PFAM protein family HMM PF00441. (344 aa)
	CC_2478	Identified by match to PFAM protein family HMM PF00441. (407 aa)
	CC_2328	Identified by match to PFAM protein family HMM PF00441. (387 aa)
	CC_2224	Cyclohexadienyl dehydrogenase; Identified by match to PFAM protein family HMM PF02153. (312 aa)
	CC_2172	isovaleryl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441. (378 aa)
	CC_2131	Identified by match to PFAM protein family HMM PF00441. (403 aa)
	CC_2050	Identified by match to PFAM protein family HMM PF00441. (377 aa)
	CC_2049	Identified by match to PFAM protein family HMM PF00441. (401 aa)
	CC_2016	Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM. (341 aa)
	CC_1807	Identified by match to PFAM protein family HMM PF00441. (382 aa)
	CC_1806	Identified by match to PFAM protein family HMM PF00441. (355 aa)
	CC_1798	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441. (381 aa)
	CC_1739	Nitrogen regulation protein Nifr3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (315 aa)
	CC_1411	Oxygen-independent coproporphyrinogen III oxidase; Identified by match to TIGR protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (454 aa)
	CC_1350	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441. (379 aa)
	CC_1311	Identified by match to PFAM protein family HMM PF00441. (401 aa)
	dusA	TIM-barrel protein, yjbN family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (341 aa)
	CC_1110	Identified by match to PFAM protein family HMM PF00441. (387 aa)
	CC_0690	Identified by match to PFAM protein family HMM PF00441. (435 aa)
	CC_0528	Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (352 aa)
	hemF	Coproporphyrinogen III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (290 aa)
	CC_0427	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441. (382 aa)
	CC_0145	Oxygen-independent coproporphyrinogen III oxidase, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (384 aa)
	CC_0080	Identified by match to PFAM protein family HMM PF00441. (597 aa)
	CC_0079	acyl-CoA dehydrogenase, long-chain specific; Identified by match to PFAM protein family HMM PF00441. (391 aa)
	CC_0024	Siroheme synthase-related protein; Similar to SP:P11098 GB:X14202 PID:581142 PID:606302 GB:U00096; identified by sequence similarity; putative. (282 aa)

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0079	CC_0080	CC_0079	CC_0080	acyl-CoA dehydrogenase, long-chain specific; Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.811
CC_0080	CC_0079	CC_0080	CC_0079	Identified by match to PFAM protein family HMM PF00441.	acyl-CoA dehydrogenase, long-chain specific; Identified by match to PFAM protein family HMM PF00441.	0.811
CC_0427	CC_1798	CC_0427	CC_1798	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441.	0.900
CC_0528	SdhA	CC_0528	CC_3527	Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Succinate dehydrogenase, flavoprotein subunit; Identified by match to protein family HMM; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.422
CC_0528	hemF	CC_0528	CC_0506	Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Coproporphyrinogen III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.	0.430
CC_0690	CC_1807	CC_0690	CC_1807	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.471
CC_1310	CC_1311	CC_1310	CC_1311	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.926
CC_1310	CC_1807	CC_1310	CC_1807	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.916
CC_1310	CC_2050	CC_1310	CC_2050	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.929
CC_1310	CC_2479	CC_1310	CC_2479	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.953
CC_1311	CC_1310	CC_1311	CC_1310	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.926
CC_1311	CC_2049	CC_1311	CC_2049	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.843
CC_1311	CC_2131	CC_1311	CC_2131	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.902
CC_1311	CC_2478	CC_1311	CC_2478	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.886
CC_1411	CC_3761	CC_1411	CC_3761	Oxygen-independent coproporphyrinogen III oxidase; Identified by match to TIGR protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.919
CC_1411	hemF	CC_1411	CC_0506	Oxygen-independent coproporphyrinogen III oxidase; Identified by match to TIGR protein family HMM TIGR00538; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	Coproporphyrinogen III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.	0.935
CC_1798	CC_0427	CC_1798	CC_0427	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441.	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	0.900
CC_1806	CC_1807	CC_1806	CC_1807	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.981
CC_1806	CC_2050	CC_1806	CC_2050	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.926
CC_1806	CC_2479	CC_1806	CC_2479	Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00441.	0.928