STRINGSTRING
CC_0658 CC_0658 CC_2616 CC_2616 CC_2444 CC_2444 CC_1973 CC_1973 CC_1972 CC_1972 CC_0961 CC_0961 hutI hutI CC_2672 CC_2672 CC_0534 CC_0534 CC_0443 CC_0443 CC_0388 CC_0388 CC_0300 CC_0300 CC_0116 CC_0116 CC_3460 CC_3460 CC_3125 CC_3125
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CC_0658Conserved hypothetical protein; Identified by Glimmer2; putative. (544 aa)
CC_2616Chlorohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (428 aa)
CC_2444Aspartate transcarbamoylase, pyrC' subunit; Identified by match to PFAM protein family HMM PF00744. (433 aa)
CC_1973Conserved hypothetical protein; Identified by Glimmer2; putative. (450 aa)
CC_1972Conserved hypothetical protein; Identified by Glimmer2; putative. (483 aa)
CC_0961Chlorohydrolase; Identified by match to PFAM protein family HMM PF01685. (459 aa)
hutIImidazolonepropionase; Identified by match to protein family HMM; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (401 aa)
CC_2672Xaa-Pro dipeptidase, putative; Identified by match to protein family HMM. (429 aa)
CC_0534N-acetylglucosamine-6-phosphate deacetylase; Identified by match to TIGR protein family HMM TIGR00221. (387 aa)
CC_0443N-acetylglucosamine-6-phosphate deacetylase; Identified by match to TIGR protein family HMM TIGR00221. (378 aa)
CC_0388Dihydroorotase; Identified by match to PFAM protein family HMM PF00744. (444 aa)
CC_0300Xaa-Pro dipeptidase, putative; Identified by match to protein family HMM. (428 aa)
CC_0116Hypothetical protein; Identified by Glimmer2; putative. (1096 aa)
CC_3460Hypothetical protein; Identified by Glimmer2; putative. (581 aa)
CC_3125Xaa-Pro dipeptidase, putative; Identified by match to protein family HMM. (431 aa)
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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