STRINGSTRING
CC_0211 CC_0211 CC_0212 CC_0212 proB proB CC_0360 CC_0360 CC_0419 CC_0419 proC proC CC_0581 CC_0581 astD1 astD1 astB1 astB1 CC_0804 CC_0804 CC_1216 CC_1216 CC_1227 CC_1227 CC_1534 CC_1534 CC_1606 CC_1606 astD2 astD2 astB2 astB2 CC_1744 CC_1744 CC_2473 CC_2473 CC_2793 CC_2793 CC_3129 CC_3129 CC_3141 CC_3141 proA proA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CC_0211Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the agmatine deiminase family. (370 aa)
CC_0212Hydrolase, carbon-nitrogen family; Identified by match to PFAM protein family HMM PF00795. (292 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (377 aa)
CC_0360Ornithine decarboxylase, putative; Identified by match to protein family HMM; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (419 aa)
CC_0419Aldehyde dehydrogenase; Identified by match to protein family HMM. (479 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (260 aa)
CC_0581Arginine N-succinyltransferase; Similar to GB:U00096 PID:1788043; identified by sequence similarity; putative. (347 aa)
astD1Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (472 aa)
astB1Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (426 aa)
CC_0804Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1029 aa)
CC_1216Aldehyde dehydrogenase; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family. (507 aa)
CC_1227Proline iminopeptidase; Identified by match to protein family HMM; Belongs to the peptidase S33 family. (320 aa)
CC_1534Aspartate aminotransferase; Identified by match to protein family HMM. (400 aa)
CC_1606Arginine N-succinyltransferase; Similar to SP:P80358; identified by sequence similarity; putative. (334 aa)
astD2Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (485 aa)
astB2Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (446 aa)
CC_1744D-alanine aminotransferase, putative; Identified by match to PFAM protein family HMM PF01063. (287 aa)
CC_2473Identified by match to PFAM protein family HMM PF01425. (497 aa)
CC_2793Amine oxidase, flavin-containing; Identified by match to PFAM protein family HMM PF01593. (541 aa)
CC_3129Conserved hypothetical protein; Identified by Glimmer2; putative. (429 aa)
CC_3141Aldehyde dehydrogenase; Identified by match to protein family HMM; Belongs to the aldehyde dehydrogenase family. (496 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (413 aa)
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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