Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQZ60924.1 | AQZ62336.1 | BKM31_04960 | BKM31_13445 | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.925 |
| AQZ60924.1 | AQZ70070.1 | BKM31_04960 | BKM31_02690 | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AQZ62336.1 | AQZ60924.1 | BKM31_13445 | BKM31_04960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.925 |
| AQZ62336.1 | AQZ70070.1 | BKM31_13445 | BKM31_02690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| AQZ64949.1 | AQZ69086.1 | BKM31_29010 | BKM31_53280 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
| AQZ65984.1 | acsA | BKM31_35020 | BKM31_43535 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.917 |
| AQZ65984.1 | prpE | BKM31_35020 | BKM31_24250 | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| AQZ69086.1 | AQZ64949.1 | BKM31_53280 | BKM31_29010 | Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
| AQZ70070.1 | AQZ60924.1 | BKM31_02690 | BKM31_04960 | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AQZ70070.1 | AQZ62336.1 | BKM31_02690 | BKM31_13445 | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.920 |
| acsA | AQZ65984.1 | BKM31_43535 | BKM31_35020 | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| acsA | prpE | BKM31_43535 | BKM31_24250 | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| prpE | AQZ65984.1 | BKM31_24250 | BKM31_35020 | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| prpE | acsA | BKM31_24250 | BKM31_43535 | Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.910 |