(5 nodes) Flagellar basal body rod protein, N-terminal network (Marinilactibacillus sp. 15R)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	flgK	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	API89613.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	flgG	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	API89635.1	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (144 aa)
	API89636.1	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (125 aa)

Your Current Organism:

Marinilactibacillus sp. 15R

NCBI taxonomy Id: 1911586
Other names: M. sp. 15R

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
API89613.1	API89635.1	BKP56_10240	BKP56_10355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.993
API89613.1	API89636.1	BKP56_10240	BKP56_10360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	0.981
API89613.1	flgG	BKP56_10240	BKP56_10305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
API89613.1	flgK	BKP56_10240	BKP56_10420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
API89635.1	API89613.1	BKP56_10355	BKP56_10240	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
API89635.1	API89636.1	BKP56_10355	BKP56_10360	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	0.999
API89635.1	flgG	BKP56_10355	BKP56_10305	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
API89635.1	flgK	BKP56_10355	BKP56_10420	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
API89636.1	API89613.1	BKP56_10360	BKP56_10240	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
API89636.1	API89635.1	BKP56_10360	BKP56_10355	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.999
API89636.1	flgG	BKP56_10360	BKP56_10305	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
API89636.1	flgK	BKP56_10360	BKP56_10420	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
flgG	API89613.1	BKP56_10305	BKP56_10240	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
flgG	API89635.1	BKP56_10305	BKP56_10355	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.998
flgG	API89636.1	BKP56_10305	BKP56_10360	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	0.997
flgG	flgK	BKP56_10305	BKP56_10420	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
flgK	API89613.1	BKP56_10420	BKP56_10240	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
flgK	API89635.1	BKP56_10420	BKP56_10355	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.993
flgK	API89636.1	BKP56_10420	BKP56_10360	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.	0.992
flgK	flgG	BKP56_10420	BKP56_10305	Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993