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CDZ74215.1 CDZ74215.1 CDZ74216.1 CDZ74216.1 CDZ74217.1 CDZ74217.1 CDZ74531.1 CDZ74531.1 CDZ74532.1 CDZ74532.1 CDZ74533.1 CDZ74533.1 CDZ74534.1 CDZ74534.1 CDZ74535.1 CDZ74535.1 CDZ74536.1 CDZ74536.1 CDZ74537.1 CDZ74537.1 CDZ74538.1 CDZ74538.1 CDZ75180.1 CDZ75180.1 CDZ75345.1 CDZ75345.1 CDZ75346.1 CDZ75346.1 CDZ75347.1 CDZ75347.1 CDZ75681.1 CDZ75681.1 CDZ75682.1 CDZ75682.1 CDZ75683.1 CDZ75683.1 CDZ75703.1 CDZ75703.1 CDZ75704.1 CDZ75704.1 CDZ75705.1 CDZ75705.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDZ74215.1TRAP-T (Tripartite ATP-independent Periplasmic Transporter) family proteins generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. The best characterized example is the DctPQM system of Rhodobacter capsulatus, a C4 dicarboxylate (malate, fumarate, succinate) transporter; High confidence in function and specificity. (346 aa)
CDZ74216.1TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein; High confidence in function and specificity. (163 aa)
CDZ74217.1TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein; The tripartite ATP-independent periplasmic (TRAP) transport system is firmly established as a new type of extracytoplasmic solute receptor (ESR)-dependent uptake systems, unrelated to ABC transporters. In TRAP transport systems the driving force for solute accumulation is an electrochemical ion gradient and not ATP hydrolysis; High confidence in function and specificity. (423 aa)
CDZ74531.1This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolizm and development in Streptomyces coelico [...] (231 aa)
CDZ74532.1TRAP-type C4-dicarboxylate transport system, periplasmic component [Carbohydrate transport and metabolism]; High confidence in function and specificity. (340 aa)
CDZ74533.1Putative membrane protein. (156 aa)
CDZ74534.1TRAP dicarboxylate transporter; High confidence in function and specificity. (428 aa)
CDZ74535.1Nitrilases; This subgroup includes mammalian Nit1 and Nit2, the Nit1-like domain of the invertebrate NitFhit, and various uncharacterized bacterial and archaeal Nit-like proteins. Nit1 and Nit2 are candidate tumor suppressor proteins. In NitFhit, the Nit1-like domain is encoded as a fusion protein with the non-homologous tumor suppressor, fragile histidine triad (Fhit). Mammalian Nit1 and Fhit may affect distinct signal pathways, and both may participate in DNA damage-induced apoptosis. Nit1 is a negative regulator in T cells. Overexpression of Nit2 in HeLa cells leads to a suppression [...] (267 aa)
CDZ74536.1Members of this family are demethylmenaquinone methyltransferases that convert dimethylmenaquinone (DMK) to menaquinone (MK) in the final step of menaquinone biosynthesis. This region is also found at the C-terminus of the DlpA protein; High confidence in function and specificity. (222 aa)
CDZ74537.1Hypothetical protein. (92 aa)
CDZ74538.1Hypothetical protein. (123 aa)
CDZ75180.1TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]; High confidence in function and specificity. (456 aa)
CDZ75345.1TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]; High confidence in function and specificity. (420 aa)
CDZ75346.1Hypothetical protein; Family membership. (182 aa)
CDZ75347.1PBP2_TRAP_Siap_TeaA_like; This subfamily includes the periplasmic-binding component of TRAP transport systems such as SiaP (a sialic acid binding virulence factor), TeaA (an ectoine binding protein), and an uncharacterized TM0322 from hyperthermophilic bacterium Thermotoga maritima. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller [...] (341 aa)
CDZ75681.1TRAP-type C4-dicarboxylate transport system; Tripartite ATP-independent periplasmic transporters (TRAP transporters) are a large family of solute transporters found in bacteria and archaea, but not in eukaryotes, that appear to be specific for the uptake of organic acids. They are unique in that they utilize a substrate binding protein (SBP) in combination with a secondary transporter; High confidence in function and specificity. (429 aa)
CDZ75682.1Hypothetical protein; Family membership. (163 aa)
CDZ75683.1PBP2_TRAP_DctP10; This subgroup includes TRAP transporter DctP10 and its similar proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or [...] (347 aa)
CDZ75703.1TRAP transporters; Tripartite ATP-independent periplasmic transporters are a large family of solute transporters found in bacteria and archaea, but not in eukaryotes, that appear to be specific for the uptake of organic acids. They are unique in that they utilize a substrate binding protein (SBP) in combination with a secondary transporter; High confidence in function and specificity. (422 aa)
CDZ75704.1TRAP transporters; Tripartite ATP-independent periplasmic transporters are a large family of solute transporters found in bacteria and archaea, but not in eukaryotes, that appear to be specific for the uptake of organic acids. They are unique in that they utilize a substrate binding protein (SBP) in combination with a secondary transporter; High confidence in function and specificity. (162 aa)
CDZ75705.1TRAP transporter; Tripartite ATP-independent periplasmic transporters (TRAP transporters) are a large family of solute transporters found in bacteria and archaea, but not in eukaryotes, that appear to be specific for the uptake of organic acids. They are unique in that they utilize a substrate binding protein (SBP) in combination with a secondary transporter; High confidence in function and specificity. (355 aa)
Your Current Organism:
Peptoniphilus sp. ING2D1G
NCBI taxonomy Id: 1912856
Other names: P. sp. ING2-D1G, Peptoniphilus sp. ING2-D1G
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