(32 nodes) Mixed, incl. Glycoside hydrolase, family 43, and Alpha-L-arabinofuranosidase C-terminus network (Streptomyces lincolnensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANS62879.1	Arabinogalactan endo-1,4-beta-galactosidase, putative. (649 aa)
	ANS62880.1	Carbohydrate binding family 6. (672 aa)
	ANS62881.1	Pectate lyase. (450 aa)
	ANS62882.1	Carbohydrate esterase family 12 domain protein. (288 aa)
	ANS62883.1	Hypothetical protein. (377 aa)
	ANS62884.1	Glycosyl hydrolase 53 domain protein. (353 aa)
	ANS63077.1	Hypothetical protein. (713 aa)
	ANS63323.1	Alpha-N-arabinofuranosidase. (505 aa)
	ANS63430.1	Hypothetical protein. (933 aa)
	ANS63447.1	Hypothetical protein. (995 aa)
	ANS63777.1	Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (496 aa)
	ANS63946.1	Hypothetical protein. (911 aa)
	ANS64009.1	alpha-N-arabinofuranosidase. (825 aa)
	ANS64378.1	Endo-1,4-beta-xylanase. (701 aa)
	ANS64982.1	Hydrolase; Belongs to the glycosyl hydrolase 43 family. (478 aa)
	ANS64983.1	Secreted arabinase. (321 aa)
	ANS64993.1	Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (999 aa)
	ANS64994.1	alpha-L-arabinofuranosidase. (504 aa)
	ANS67182.1	Arabinogalactan endo-1,4-beta-galactosidase. (389 aa)
	ANS68333.1	Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. (682 aa)
	ANS68864.1	alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (368 aa)
	ANS68865.1	Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (471 aa)
	ANS68866.1	Rhamnogalacturonase B precursor. (559 aa)
	ANS68867.1	Carbohydrate esterase family 12 protein. (359 aa)
	ANS68868.1	Hypothetical protein. (568 aa)
	ANS68869.1	Hypothetical protein. (668 aa)
	ANS68912.1	Alpha-arabinofuranosidase II; Belongs to the glycosyl hydrolase 43 family. (482 aa)
	ANS68913.1	Hydrolase; Belongs to the glycosyl hydrolase 43 family. (491 aa)
	ANS69436.1	Hypothetical protein. (238 aa)
	ANS70411.1	Xylosidase glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 43 family. (524 aa)
	ANS70501.1	Carbohydrate binding family 6 protein; Belongs to the glycosyl hydrolase 43 family. (477 aa)
	ANS70503.1	Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. (506 aa)

Your Current Organism:

Streptomyces lincolnensis

NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANS62879.1	ANS62880.1	SLINC_0655	SLINC_0656	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Carbohydrate binding family 6.	0.741
ANS62879.1	ANS62881.1	SLINC_0655	SLINC_0657	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Pectate lyase.	0.646
ANS62879.1	ANS62882.1	SLINC_0655	SLINC_0658	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Carbohydrate esterase family 12 domain protein.	0.486
ANS62879.1	ANS62883.1	SLINC_0655	SLINC_0659	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Hypothetical protein.	0.474
ANS62879.1	ANS62884.1	SLINC_0655	SLINC_0660	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Glycosyl hydrolase 53 domain protein.	0.477
ANS62879.1	ANS63323.1	SLINC_0655	SLINC_1099	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Alpha-N-arabinofuranosidase.	0.437
ANS62879.1	ANS63447.1	SLINC_0655	SLINC_1223	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Hypothetical protein.	0.584
ANS62879.1	ANS63777.1	SLINC_0655	SLINC_1553	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.	0.565
ANS62879.1	ANS64983.1	SLINC_0655	SLINC_2759	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Secreted arabinase.	0.562
ANS62879.1	ANS68865.1	SLINC_0655	SLINC_6641	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.	0.588
ANS62879.1	ANS68866.1	SLINC_0655	SLINC_6642	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Rhamnogalacturonase B precursor.	0.411
ANS62879.1	ANS70411.1	SLINC_0655	SLINC_8187	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Xylosidase glycosyl hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.	0.551
ANS62879.1	ANS70501.1	SLINC_0655	SLINC_8277	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Carbohydrate binding family 6 protein; Belongs to the glycosyl hydrolase 43 family.	0.587
ANS62879.1	ANS70503.1	SLINC_0655	SLINC_8279	Arabinogalactan endo-1,4-beta-galactosidase, putative.	Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.	0.538
ANS62880.1	ANS62879.1	SLINC_0656	SLINC_0655	Carbohydrate binding family 6.	Arabinogalactan endo-1,4-beta-galactosidase, putative.	0.741
ANS62880.1	ANS62881.1	SLINC_0656	SLINC_0657	Carbohydrate binding family 6.	Pectate lyase.	0.762
ANS62880.1	ANS62882.1	SLINC_0656	SLINC_0658	Carbohydrate binding family 6.	Carbohydrate esterase family 12 domain protein.	0.533
ANS62880.1	ANS62883.1	SLINC_0656	SLINC_0659	Carbohydrate binding family 6.	Hypothetical protein.	0.643
ANS62880.1	ANS62884.1	SLINC_0656	SLINC_0660	Carbohydrate binding family 6.	Glycosyl hydrolase 53 domain protein.	0.563
ANS62880.1	ANS63077.1	SLINC_0656	SLINC_0853	Carbohydrate binding family 6.	Hypothetical protein.	0.632

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