(63 nodes) Mixed, incl. Other glycan degradation, and Galactosidase activity network (Streptomyces lincolnensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANS62302.1	Secreted protein. (1003 aa)
	ANS62431.1	Calx-beta domain-containing protein. (647 aa)
	ANS62857.1	Putative oxidoreductase. (97 aa)
	ANS62875.1	Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain. (936 aa)
	ANS62933.1	Hypothetical protein. (750 aa)
	ANS62977.1	Alpha-rhamnosidase. (144 aa)
	ANS63036.1	Beta-galactosidase. (673 aa)
	ANS63053.1	Glycosyl hydrolase. (417 aa)
	ANS63246.1	Hypothetical protein. (1310 aa)
	ANS63247.1	Inositol transport protein. (432 aa)
	ANS63248.1	L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (489 aa)
	ANS63451.1	Hypothetical protein. (1752 aa)
	ANS64562.1	Beta-galactosidase. (593 aa)
	ANS64563.1	AraC family transcriptional regulator. (317 aa)
	ANS64564.1	Hypothetical protein. (294 aa)
	ANS64961.1	Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (324 aa)
	ANS64980.1	Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (382 aa)
	ANS65138.1	Neuramidase. (401 aa)
	ANS66819.1	Hypothetical protein. (261 aa)
	ANS68100.1	Arylsulfatase. (221 aa)
	ANS68881.1	Beta-galactosidase. (964 aa)
	ANS69068.1	Beta-galactosidase. (1329 aa)
	ANS69200.1	Neuraminidase. (616 aa)
	ANS69301.1	Hypothetical protein. (556 aa)
	ANS69302.1	Hypothetical protein. (608 aa)
	ANS69304.1	Beta-galactosidase. (976 aa)
	ANS69307.1	Carbohydrate kinase. (370 aa)
	ANS69308.1	DeoR-family transcriptional regulator. (254 aa)
	ANS69309.1	6-phospho-beta-glucosidase. (445 aa)
	ANS69310.1	Alpha-mannosidase. (1014 aa)
	ANS69311.1	Tissue alpha-L-fucosidase. (416 aa)
	ANS69312.1	Hypothetical protein. (177 aa)
	ANS69434.1	Alpha-galactosidase. (693 aa)
	ANS69447.1	Hypothetical protein. (205 aa)
	ANS69565.1	Integral membrane protein. (407 aa)
	ANS69566.1	Hypothetical protein. (274 aa)
	ANS69569.1	Hydrolase (secreted protein); Belongs to the glycosyl hydrolase 2 family. (871 aa)
	ANS69571.1	Oxidoreductase. (497 aa)
	ANS69577.1	lacto-N-biosidase. (610 aa)
	ANS69578.1	Alpha-1,3/4-fucosidase. (531 aa)
	ANS69697.1	Rhamnosidase. (357 aa)
	ANS69721.1	Hypothetical protein. (1068 aa)
	ANS69815.1	Glycoside hydrolase clan GH-D. (719 aa)
	ANS69841.1	HTH-type transcriptional repressor purR. (362 aa)
	ANS69842.1	Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (794 aa)
	ANS69843.1	Beta-galactosidase. (587 aa)
	ANS69844.1	Major facilitator transporter. (404 aa)
	ANS69845.1	DNA-binding protein. (245 aa)
	ANS69846.1	Threonine dehydratase. (325 aa)
	ANS69847.1	Hypothetical protein. (120 aa)
	ANS69864.1	Inositol transport protein. (434 aa)
	ANS69865.1	alpha-L-rhamnosidase A. (881 aa)
	ANS69943.1	Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1033 aa)
	ANS70109.1	Beta-galactosidase. (679 aa)
	ANS70303.1	Alpha-mannosidase. (1019 aa)
	ANS70351.1	Glucan endo-1,6-beta-glucosidase; Belongs to the glycosyl hydrolase 30 family. (978 aa)
	ANS70491.1	Beta-galactosidase. (710 aa)
	ANS70500.1	Carbohydrate binding family 6 protein. (548 aa)
	ANS70504.1	Hypothetical protein. (713 aa)
	ANS70505.1	Beta-galactosidase. (661 aa)
	ANS70509.1	Alpha-L-fucosidase. (743 aa)
	ANS70589.1	alpha-L-fucosidase, putative. (782 aa)
	ANS70771.1	Putative shikimate kinase. (149 aa)

Your Current Organism:

Streptomyces lincolnensis

NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANS62302.1	ANS69697.1	SLINC_0078	SLINC_7473	Secreted protein.	Rhamnosidase.	0.596
ANS62302.1	ANS69721.1	SLINC_0078	SLINC_7497	Secreted protein.	Hypothetical protein.	0.743
ANS62302.1	ANS69865.1	SLINC_0078	SLINC_7641	Secreted protein.	alpha-L-rhamnosidase A.	0.434
ANS62431.1	ANS62875.1	SLINC_0207	SLINC_0651	Calx-beta domain-containing protein.	Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain.	0.634
ANS62431.1	ANS62977.1	SLINC_0207	SLINC_0753	Calx-beta domain-containing protein.	Alpha-rhamnosidase.	0.425
ANS62431.1	ANS64562.1	SLINC_0207	SLINC_2338	Calx-beta domain-containing protein.	Beta-galactosidase.	0.461
ANS62431.1	ANS68881.1	SLINC_0207	SLINC_6657	Calx-beta domain-containing protein.	Beta-galactosidase.	0.447
ANS62431.1	ANS69068.1	SLINC_0207	SLINC_6844	Calx-beta domain-containing protein.	Beta-galactosidase.	0.569
ANS62431.1	ANS69304.1	SLINC_0207	SLINC_7080	Calx-beta domain-containing protein.	Beta-galactosidase.	0.527
ANS62431.1	ANS69569.1	SLINC_0207	SLINC_7345	Calx-beta domain-containing protein.	Hydrolase (secreted protein); Belongs to the glycosyl hydrolase 2 family.	0.438
ANS62431.1	ANS69577.1	SLINC_0207	SLINC_7353	Calx-beta domain-containing protein.	lacto-N-biosidase.	0.657
ANS62431.1	ANS69697.1	SLINC_0207	SLINC_7473	Calx-beta domain-containing protein.	Rhamnosidase.	0.408
ANS62431.1	ANS69842.1	SLINC_0207	SLINC_7618	Calx-beta domain-containing protein.	Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.	0.439
ANS62431.1	ANS69843.1	SLINC_0207	SLINC_7619	Calx-beta domain-containing protein.	Beta-galactosidase.	0.468
ANS62431.1	ANS69943.1	SLINC_0207	SLINC_7719	Calx-beta domain-containing protein.	Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.	0.669
ANS62431.1	ANS70500.1	SLINC_0207	SLINC_8276	Calx-beta domain-containing protein.	Carbohydrate binding family 6 protein.	0.675
ANS62431.1	ANS70509.1	SLINC_0207	SLINC_8285	Calx-beta domain-containing protein.	Alpha-L-fucosidase.	0.712
ANS62875.1	ANS62431.1	SLINC_0651	SLINC_0207	Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain.	Calx-beta domain-containing protein.	0.634
ANS62875.1	ANS62977.1	SLINC_0651	SLINC_0753	Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain.	Alpha-rhamnosidase.	0.521
ANS62875.1	ANS63036.1	SLINC_0651	SLINC_0812	Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain.	Beta-galactosidase.	0.449

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