Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APD47241.1 | APD47653.1 | BM449_01595 | BM449_04440 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.752 |
| APD47241.1 | APD47782.1 | BM449_01595 | BM449_05285 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosystem II assembly protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.753 |
| APD47241.1 | APD47783.1 | BM449_01595 | BM449_05290 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
| APD47241.1 | APD47978.1 | BM449_01595 | BM449_06575 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| APD47241.1 | APD48443.1 | BM449_01595 | BM449_09610 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.739 |
| APD47241.1 | APD48586.1 | BM449_01595 | BM449_10530 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| APD47241.1 | APD48608.1 | BM449_01595 | BM449_10670 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| APD47241.1 | APD48688.1 | BM449_01595 | BM449_11140 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination-mediator protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.758 |
| APD47241.1 | APD49242.1 | BM449_01595 | BM449_02875 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| APD47241.1 | BM449_01080 | BM449_01595 | BM449_01080 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| APD47241.1 | thf1 | BM449_01595 | BM449_12420 | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis. | 0.761 |
| APD47653.1 | APD47241.1 | BM449_04440 | BM449_01595 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.752 |
| APD47653.1 | APD47782.1 | BM449_04440 | BM449_05285 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Photosystem II assembly protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.692 |
| APD47653.1 | APD47783.1 | BM449_04440 | BM449_05290 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| APD47653.1 | APD47978.1 | BM449_04440 | BM449_06575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| APD47653.1 | APD48443.1 | BM449_04440 | BM449_09610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.660 |
| APD47653.1 | APD48586.1 | BM449_04440 | BM449_10530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
| APD47653.1 | APD48608.1 | BM449_04440 | BM449_10670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| APD47653.1 | APD48688.1 | BM449_04440 | BM449_11140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination-mediator protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
| APD47653.1 | APD49242.1 | BM449_04440 | BM449_02875 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
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