(12 nodes) Mixed, incl. N-acetyltransferase activity, and Protein of unknown function DUF1997 network (Synechococcus sp. SynAce01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD46995.1	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
	APD47312.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
	APD49261.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
	APD47513.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	APD47516.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	APD49458.1	Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	APD48253.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
	APD48320.1	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	APD49529.1	30S ribosomal protein Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (166 aa)
	APD48785.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)
	APD48937.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	APD49018.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)

Your Current Organism:

Synechococcus sp. SynAce01

NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD46995.1	APD47312.1	BM449_00020	BM449_02090	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
APD46995.1	APD47513.1	BM449_00020	BM449_03465	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
APD46995.1	APD47516.1	BM449_00020	BM449_03480	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
APD46995.1	APD48253.1	BM449_00020	BM449_08380	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
APD46995.1	APD48320.1	BM449_00020	BM449_08770	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543
APD46995.1	APD48785.1	BM449_00020	BM449_11720	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
APD46995.1	APD48937.1	BM449_00020	BM449_12670	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
APD46995.1	APD49018.1	BM449_00020	BM449_13185	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
APD46995.1	APD49261.1	BM449_00020	BM449_03135	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
APD46995.1	APD49458.1	BM449_00020	BM449_08355	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
APD46995.1	APD49529.1	BM449_00020	BM449_10285	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.	0.683
APD47312.1	APD46995.1	BM449_02090	BM449_00020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
APD47312.1	APD47513.1	BM449_02090	BM449_03465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.719
APD47312.1	APD47516.1	BM449_02090	BM449_03480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
APD47312.1	APD48253.1	BM449_02090	BM449_08380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
APD47312.1	APD48320.1	BM449_02090	BM449_08770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
APD47312.1	APD48785.1	BM449_02090	BM449_11720	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
APD47312.1	APD48937.1	BM449_02090	BM449_12670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
APD47312.1	APD49018.1	BM449_02090	BM449_13185	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
APD47312.1	APD49261.1	BM449_02090	BM449_03135	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748