(6 nodes) Lipid transport, and Lactose permease-like network (Synechococcus sp. SynAce01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD49288.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
	APD47571.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family. (249 aa)
	APD47572.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
	APD47573.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	APD49344.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	APD47787.1	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)

Your Current Organism:

Synechococcus sp. SynAce01

NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD47571.1	APD47572.1	BM449_03855	BM449_03860	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
APD47571.1	APD47573.1	BM449_03855	BM449_03865	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
APD47571.1	APD47787.1	BM449_03855	BM449_05320	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APD47571.1	APD49288.1	BM449_03855	BM449_03850	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
APD47571.1	APD49344.1	BM449_03855	BM449_05315	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APD47572.1	APD47571.1	BM449_03860	BM449_03855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.703
APD47572.1	APD47573.1	BM449_03860	BM449_03865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
APD47572.1	APD47787.1	BM449_03860	BM449_05320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
APD47572.1	APD49288.1	BM449_03860	BM449_03850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
APD47573.1	APD47571.1	BM449_03865	BM449_03855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.699
APD47573.1	APD47572.1	BM449_03865	BM449_03860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
APD47573.1	APD49288.1	BM449_03865	BM449_03850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
APD47787.1	APD47571.1	BM449_05320	BM449_03855	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.997
APD47787.1	APD47572.1	BM449_05320	BM449_03860	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
APD47787.1	APD49344.1	BM449_05320	BM449_05315	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APD49288.1	APD47571.1	BM449_03850	BM449_03855	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.772
APD49288.1	APD47572.1	BM449_03850	BM449_03860	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
APD49288.1	APD47573.1	BM449_03850	BM449_03865	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
APD49344.1	APD47571.1	BM449_05315	BM449_03855	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.	0.999
APD49344.1	APD47787.1	BM449_05315	BM449_05320	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999