(8 nodes) Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit network (Synechococcus sp. SynAce01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD47514.1	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
	APD47577.1	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	APD47634.1	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	APD48647.1	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
	cbiM	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (239 aa)
	cbiN	Cobalt ABC transporter substrate-binding protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (119 aa)
	APD49044.1	Cobalt ECF transporter T component CbiQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	APD49045.1	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (291 aa)

Your Current Organism:

Synechococcus sp. SynAce01

NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD47514.1	APD47577.1	BM449_03470	BM449_03895	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
APD47514.1	APD47634.1	BM449_03470	BM449_04320	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
APD47514.1	APD48647.1	BM449_03470	BM449_10900	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
APD47514.1	APD49044.1	BM449_03470	BM449_13340	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ECF transporter T component CbiQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
APD47514.1	cbiM	BM449_03470	BM449_13330	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.927
APD47514.1	cbiN	BM449_03470	BM449_13335	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter substrate-binding protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.654
APD47577.1	APD47514.1	BM449_03895	BM449_03470	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
APD47577.1	APD47634.1	BM449_03895	BM449_04320	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
APD47577.1	APD48647.1	BM449_03895	BM449_10900	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
APD47577.1	APD49045.1	BM449_03895	BM449_13345	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.946
APD47577.1	cbiM	BM449_03895	BM449_13330	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.980
APD47577.1	cbiN	BM449_03895	BM449_13335	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter substrate-binding protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.817
APD47634.1	APD47514.1	BM449_04320	BM449_03470	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
APD47634.1	APD47577.1	BM449_04320	BM449_03895	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
APD47634.1	APD48647.1	BM449_04320	BM449_10900	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
APD47634.1	APD49044.1	BM449_04320	BM449_13340	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ECF transporter T component CbiQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
APD47634.1	cbiM	BM449_04320	BM449_13330	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.927
APD47634.1	cbiN	BM449_04320	BM449_13335	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter substrate-binding protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.654
APD48647.1	APD47514.1	BM449_10900	BM449_03470	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
APD48647.1	APD47577.1	BM449_10900	BM449_03895	BioY family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987