(43 nodes) Mixed, incl. Ion transmembrane transporter activity, and Putative DNA-binding domain network (Synechococcus sp. SynAce01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BM449_00645	HPP family protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)
	APD49180.1	EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
	APD47217.1	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	APD47239.1	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (811 aa)
	APD47240.1	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	APD47263.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (601 aa)
	APD47455.1	VIC family potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	APD47492.1	Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
	APD49305.1	Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	APD49308.1	ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)
	APD49330.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	APD47718.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
	APD47719.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family. (279 aa)
	APD49331.1	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	APD47764.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
	APD47765.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family. (273 aa)
	APD47766.1	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	APD47929.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (429 aa)
	APD47940.1	5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	APD49392.1	ClC family H(+)/Cl(-) exchange transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
	APD48063.1	Magnesium transporter; Acts as a magnesium transporter. (472 aa)
	APD48395.1	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	APD48397.1	SLC13 family permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	APD48498.1	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	APD49554.1	Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	APD48823.1	Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	APD49576.1	C50 carotenoid epsilon cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	APD48845.1	Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
	APD49577.1	Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (894 aa)
	APD48846.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	APD49580.1	Potassium transporter TrkG; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	APD48987.1	Cation-efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (310 aa)
	APD48988.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
	APD48989.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (275 aa)
	trpS	tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (338 aa)
	APD49013.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
	APD49022.1	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (604 aa)
	APD49067.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
	APD49068.1	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	APD49069.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
	APD49070.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (537 aa)
	APD49115.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
	APD49639.1	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M50B family. (425 aa)

Your Current Organism:

Synechococcus sp. SynAce01

NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD47217.1	APD49180.1	BM449_01420	BM449_01415	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
APD47239.1	APD47929.1	BM449_01575	BM449_06265	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.579
APD47239.1	APD49070.1	BM449_01575	BM449_13505	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.561
APD47239.1	APD49308.1	BM449_01575	BM449_04345	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
APD47239.1	APD49392.1	BM449_01575	BM449_06530	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ClC family H(+)/Cl(-) exchange transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
APD47239.1	BM449_00645	BM449_01575	BM449_00645	Plasma-membrane proton-efflux P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	HPP family protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
APD47240.1	APD49068.1	BM449_01590	BM449_13495	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
APD47455.1	APD47929.1	BM449_03070	BM449_06265	VIC family potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.408
APD47455.1	APD49392.1	BM449_03070	BM449_06530	VIC family potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ClC family H(+)/Cl(-) exchange transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APD47455.1	APD49580.1	BM449_03070	BM449_12140	VIC family potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium transporter TrkG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
APD47718.1	APD47719.1	BM449_04875	BM449_04880	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	0.961
APD47718.1	APD47765.1	BM449_04875	BM449_05175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	0.914
APD47718.1	APD47766.1	BM449_04875	BM449_05180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
APD47718.1	APD49330.1	BM449_04875	BM449_04870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
APD47718.1	APD49331.1	BM449_04875	BM449_04885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
APD47719.1	APD47718.1	BM449_04880	BM449_04875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
APD47719.1	APD47764.1	BM449_04880	BM449_05170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APD47719.1	APD47766.1	BM449_04880	BM449_05180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
APD47719.1	APD49067.1	BM449_04880	BM449_13490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
APD47719.1	APD49331.1	BM449_04880	BM449_04885	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.	DUF2063 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984