STRINGSTRING
psbF psbF BM449_00865 BM449_00865 psbL psbL APD47974.1 APD47974.1 psbK psbK psbI psbI APD48531.1 APD48531.1 psb28 psb28 thf1 thf1 APD48967.1 APD48967.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psbFCytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (45 aa)
BM449_00865DDE transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
psbLPhotosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. (39 aa)
APD47974.1Photosystem II protein PsbQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
psbKPhotosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (50 aa)
psbIPhotosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (39 aa)
APD48531.1Photosystem II S4 domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
psb28Photosystem II reaction center protein Psb28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Psb28 family. (132 aa)
thf1Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis. (264 aa)
APD48967.1Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
Your Current Organism:
Synechococcus sp. SynAce01
NCBI taxonomy Id: 1916956
Other names: S. sp. SynAce01
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