Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGT30417.1 | AGT30644.1 | M493_01325 | M493_01420 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.517 |
| AGT30417.1 | AGT31159.1 | M493_01325 | M493_04270 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family. | 0.717 |
| AGT30417.1 | AGT31394.1 | M493_01325 | M493_05480 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family. | 0.718 |
| AGT30417.1 | AGT31429.1 | M493_01325 | M493_05655 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 2B; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.738 |
| AGT30417.1 | AGT31430.1 | M493_01325 | M493_05660 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein D; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.652 |
| AGT30417.1 | AGT31435.1 | M493_01325 | M493_05685 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein E; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family. | 0.719 |
| AGT30417.1 | AGT31941.1 | M493_01325 | M493_08310 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.845 |
| AGT30417.1 | AGT32480.2 | M493_01325 | M493_11150 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.865 |
| AGT30417.1 | AGT32799.1 | M493_01325 | M493_12765 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.578 |
| AGT30417.1 | AGT32882.1 | M493_01325 | M493_13200 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 4B; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.578 |
| AGT30417.1 | AGT33135.1 | M493_01325 | M493_14485 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.867 |
| AGT30417.1 | AGT33769.1 | M493_01325 | M493_17815 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 2D; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.869 |
| AGT30417.1 | ftsA | M493_01325 | M493_05710 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.918 |
| AGT30417.1 | ftsZ | M493_01325 | M493_05715 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.544 |
| AGT30417.1 | murA | M493_01325 | M493_17490 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.513 |
| AGT30417.1 | murA-2 | M493_01325 | M493_17705 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.423 |
| AGT30417.1 | murB | M493_01325 | M493_04710 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.448 |
| AGT30417.1 | murC | M493_01325 | M493_14545 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.410 |
| AGT30417.1 | murD | M493_01325 | M493_05680 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.406 |
| AGT30417.1 | murE | M493_01325 | M493_05665 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.550 |
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