(3 nodes) Pyruvate ferredoxin/flavodoxin oxidoreductase network (Geobacillus genomosp.)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGT32680.1	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (578 aa)
	AGT32153.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (336 aa)
	AGT31613.1	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (590 aa)

Your Current Organism:

Geobacillus genomosp.

NCBI taxonomy Id: 1921421
Other names: Bacillus sp. JF8, G. genomosp. 3, Geobacillus genomosp. 3, Geobacillus genomospecies 3, Geobacillus sp. JF8

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGT31613.1	AGT32153.1	M493_06605	M493_09455	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
AGT31613.1	AGT32680.1	M493_06605	M493_12165	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
AGT32153.1	AGT31613.1	M493_09455	M493_06605	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
AGT32153.1	AGT32680.1	M493_09455	M493_12165	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
AGT32680.1	AGT31613.1	M493_12165	M493_06605	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
AGT32680.1	AGT32153.1	M493_12165	M493_09455	2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997