STRINGSTRING
API57956.1 API57956.1 API58028.1 API58028.1 API58029.1 API58029.1 API60877.1 API60877.1 API58062.1 API58062.1 API58170.1 API58170.1 API58171.1 API58171.1 API58172.1 API58172.1 API58173.1 API58173.1 API60889.1 API60889.1 API58192.1 API58192.1 thiE thiE thiC thiC API58332.1 API58332.1 bioD bioD API58334.1 API58334.1 API58335.1 API58335.1 API58336.1 API58336.1 API60905.1 API60905.1 API58409.1 API58409.1 API58410.1 API58410.1 API58411.1 API58411.1 API58412.1 API58412.1 API58413.1 API58413.1 API60916.1 API60916.1 API58414.1 API58414.1 API60917.1 API60917.1 API58415.1 API58415.1 API58416.1 API58416.1 API58417.1 API58417.1 API58419.1 API58419.1 API60918.1 API60918.1 API58420.1 API58420.1 API58421.1 API58421.1 API58422.1 API58422.1 API58423.1 API58423.1 API58424.1 API58424.1 API60919.1 API60919.1 API58425.1 API58425.1 API58426.1 API58426.1 API58427.1 API58427.1 API58428.1 API58428.1 API58429.1 API58429.1 API58430.1 API58430.1 API58431.1 API58431.1 API58432.1 API58432.1 API58433.1 API58433.1 API58566.1 API58566.1 API60927.1 API60927.1 API58567.1 API58567.1 API60972.1 API60972.1 API58933.1 API58933.1 API58934.1 API58934.1 API58935.1 API58935.1 API58936.1 API58936.1 API58937.1 API58937.1 API58938.1 API58938.1 API58939.1 API58939.1 API60973.1 API60973.1 API58940.1 API58940.1 API58941.1 API58941.1 API60974.1 API60974.1 API58942.1 API58942.1 API58943.1 API58943.1 API58944.1 API58944.1 API58945.1 API58945.1 API58946.1 API58946.1 API58947.1 API58947.1 API59054.1 API59054.1 bioB bioB API59336.1 API59336.1 API61051.1 API61051.1 API61060.1 API61060.1 BSL82_11395 BSL82_11395 API59848.1 API59848.1 API59849.1 API59849.1 API60016.1 API60016.1 API60043.1 API60043.1 API60096.1 API60096.1 API60336.1 API60336.1 fcl fcl API60625.1 API60625.1 API61214.1 API61214.1 API60626.1 API60626.1 API60627.1 API60627.1 API60628.1 API60628.1 API60629.1 API60629.1 API60630.1 API60630.1 API60631.1 API60631.1 API60632.1 API60632.1 API61215.1 API61215.1 API60633.1 API60633.1 API60634.1 API60634.1 API60635.1 API60635.1 API60636.1 API60636.1 API60637.1 API60637.1 API60638.1 API60638.1 gmd gmd API60656.1 API60656.1 API60657.1 API60657.1 API60658.1 API60658.1 API60659.1 API60659.1 API60660.1 API60660.1 API60661.1 API60661.1 API61218.1 API61218.1 API60664.1 API60664.1 API60666.1 API60666.1 API61221.1 API61221.1 API60734.1 API60734.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
API57956.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (906 aa)
API58028.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
API58029.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
API60877.1Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
API58062.1UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
API58170.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
API58171.1Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
API58172.1Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
API58173.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
API60889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (270 aa)
API58192.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily. (271 aa)
thiEThiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (234 aa)
thiCPhosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. (640 aa)
API58332.1Adenosylmethionine--8-amino-7-oxononanoate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (414 aa)
bioDDethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (228 aa)
API58334.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
API58335.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
API58336.18-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
API60905.1Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
API58409.1Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
API58410.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
API58411.1Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
API58412.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
API58413.1Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
API60916.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (406 aa)
API58414.1Nucleotide sugar dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
API60917.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
API58415.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
API58416.1Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
API58417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)
API58419.1PIG-L domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
API60918.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
API58420.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
API58421.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
API58422.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
API58423.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (766 aa)
API58424.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
API60919.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
API58425.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (526 aa)
API58426.1Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
API58427.1CDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
API58428.1NarL family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (403 aa)
API58429.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
API58430.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
API58431.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
API58432.1UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (430 aa)
API58433.1Protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
API58566.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
API60927.1Amylovoran biosynthesis protein AmsD; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
API58567.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
API60972.1NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
API58933.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
API58934.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
API58935.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
API58936.1Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
API58937.1CDP-paratose 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
API58938.1Nucleoside-diphosphate-sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
API58939.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
API60973.1Methyltransferase, TIGR04290 family; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
API58940.1Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
API58941.1Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
API60974.1L-iditol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
API58942.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
API58943.1Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
API58944.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
API58945.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
API58946.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (166 aa)
API58947.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
API59054.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
bioBBiotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (328 aa)
API59336.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (238 aa)
API61051.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
API61060.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
BSL82_11395DUF305 domain-containing protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
API59848.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
API59849.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (86 aa)
API60016.1UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
API60043.13'(2'),5'-bisphosphate nucleotidase CysQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
API60096.1Thiamine phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
API60336.1UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (363 aa)
fclGDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (327 aa)
API60625.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
API61214.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
API60626.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
API60627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
API60628.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
API60629.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (312 aa)
API60630.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
API60631.1Pyridoxal-5'-phosphate-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
API60632.1NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
API61215.1Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
API60633.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
API60634.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
API60635.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
API60636.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
API60637.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
API60638.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (372 aa)
API60656.1Phosphatidylglycerophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (380 aa)
API60657.1HIT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
API60658.1Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
API60659.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
API60660.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (208 aa)
API60661.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (112 aa)
API61218.1Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
API60664.18-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
API60666.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
API61221.1acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
API60734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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