STRINGSTRING
API58627.1 API58627.1 API58628.1 API58628.1 API58629.1 API58629.1 API60935.1 API60935.1 API58630.1 API58630.1 API58631.1 API58631.1 API58633.1 API58633.1 API58635.1 API58635.1 API58636.1 API58636.1 API58637.1 API58637.1 API58638.1 API58638.1 API58639.1 API58639.1 API60084.1 API60084.1 BSL82_14020 BSL82_14020
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
API58627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
API58628.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
API58629.1Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
API60935.1Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
API58630.1Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
API58631.1Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
API58633.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
API58635.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
API58636.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
API58637.13-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
API58638.13-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
API58639.13-oxoadipyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
API60084.1Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
BSL82_14020Transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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